YALI0E26433g

Overview

Description similar to uniprot|P35195 Saccharomyces cerevisiae YBL001c ECM15 involved in cell wall biogenesis and architecture
Locus type CDS
Locus tag YALI0E26433g

Location

Species Yarrowia lipolytica Positions 3140262..3140894
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 633 (nuc.)
Previous locus YALI0E26411r Next locus YALI0E26455g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E26433g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E26433gYALI0E26433g_mRNA-001YALI0E26433g_CDS-001

Nucleotide sequence

 

>YALI0E26433g
ATGCCCACACTCCACTGCCTTGCCGACCTTTGCCTCATTCCTGTGAGTTACGCCGATACT
ATCAATTAATGTACCCCGAAATATGACTAACACAGATTGGAACAGGCAACGCCTCAGTTT
CTGAGTACGTGACCGACGTGGTTCGAGTCATCAAGGCATCAGGTCTGCACTACGTCCTCC
ACAGTGCCGGCACCACCATCGGTGAGTATACATACGCTTCACAGACAAGTCACACAGAGA
GTGGATCATACACAGTCACACACCACACGCAGTTTTGTGGGGACACAAAGGCATGTCGTG
CGATACAGACGCCAATCACACCAACCTTGTCACTCGTTGACATGAGCTAACCACAGAAGG
ACCCTGGGATGAGGTGTGTGCCACCATCGGAAAGGCACACGAAGCCCTGCACGAGAAGGG
CGTCGTTCGAATCCAGAGCGATATCCGAATCGGAACACGAACCGACAAGGATCAATCTCC
CCAGGACAAAATCGACGCTGTTATGCGACACTTGAGTAAGGACGAGGAGAAGAAATAGTC
ACGTGACTTACATCACCTACAAGCAATGCCCACCGTCCCATACGTCAATGTGCACGTCTT
TCCATAGCTGAATGCATTCTTTCCACATACCAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E26433g_CDS-001

Protein length: 110 aa.
Product: Conserved hypothetical protein

>YALI0E26433g_CDS-001 MPTLHCLADLCLIPIGTGNASVSEYVTDVVRVIKASGLHYVLHSAGTTIEGPWDEVCATI
GKAHEALHEKGVVRIQSDIRIGTRTDKDQSPQDKIDAVMRHLSKDEEKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG