YALI0E26191g

Overview

Description weakly similar to uniprot|B9H752 Populus trichocarpa POPTR_0005s16680g predicted protein
Locus type CDS
Locus tag YALI0E26191g

Location

Species Yarrowia lipolytica Positions 3108415..3110158
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1744 (nuc.)
Previous locus YALI0E26169g Next locus YALI0E26213r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E26191g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E26191gYALI0E26191g_mRNA-001YALI0E26191g_CDS-001

Nucleotide sequence

 

>YALI0E26191g
ATGGACTGGCAACCGGGCTATCCTTCCGAGCCCTTTGGGGCGTACATGGAGCCTCTGGAC
CCCCCCTACCAGGTGCCCGTCATCCCACAGGACATTTTCGATGACTTGGGCGATCTGGAT
ACCACCTCTTCTCACGACACGGAGATGGATCTGGACATGGACATGGGGCCTCCCAGCCAC
TACATGCGCGATGTTGCGATCCGAGAGAGTGCTGCAGCCGAGGGCGTGGACGAGGACCGG
CCAGACTGCTTCTTCAAGTTTCTGGAAGAGGAGTTTCGTCAGGGTACTCTCTCCTCAGAG
CTGTACCAGAGATCAGTATACAAAACGGTGGAGTTTCCGGACACTGTTACCCCAGACGTC
TTGTGTGAGCATCCGATTCTCGACAAACAGGGACTCGAGTGGGGTACGCTGTTTGAGTCG
TCCCGAAGAGGCTCCTTTCTCATCCCCGACGGAGTATGTGAAAGCGTGGCAACCCACAAG
GCTCTGGTGCGCAAACTCAGATACCAGCGCTACGCGGCTTACCGTCCGCCACCTAGCGCA
TCTCCAACGATTCAAGGCTTCGAGCACTCACTCATGGCGTTCCAGCGGTGCTTCACTAAC
CCCAAACCCCATCTTTTCCATTTCCAGCTGAGAAACCTGATGTATCCCGTTTCAGCCACG
CAGGTTTTCTACAATGCCAATCATATGGATGACTTCCAGGTGGATATGCTCAATCCAGAA
ACGGGCGAACAGACGGTCGCAATATCACCTGAAATGTGTGACCCATCTCTCCAGCAATTG
AGAGTGTCCGCCTTAGCAGCTAACAGGAACGTGGTTATGCTGGGAAGCACAAAGGGCGTG
TTTGTGGTGAAACCGTTGGCTGAAACGTCGTCGTCAGAAAAGAAATCGTTTCTCTCTTCG
GGCATGATATCGTCTGGTAACGAACTACAGGTCAACTACATCTCCTTGTTGTCCTCTTCA
GCCCTGATATCAGGCAACGACAACGTTCTTCGGACTCTGGACCTGAACACTCTTAAGGCA
AAAGACTCCATTACACTCAACTATGCTGCTAATGCTACGGCCTTTCTCCCAGGCTCGGAA
AATGTCTGCGTCATGGCTTGTGACTCGCAGGAGTCGCACGTCTACGACTCGCGATCGGGT
AAACTGCAAATGTCATTGCAGGGTCACACGGACTTCGGATTTGCATGTGCCTGGTCTCCC
GATGGCAAAACAGTGGCTACAGGCAACCAGGACGGAACTTGCCGTCTGTACGACATCCGA
GGAGCGTCCAACCAATGCATCGGCGCCGTTTCGGGAAAGTTGCAGGCAGCTATTCGGTCC
GTGGATTTTGATGCTTCCGGAAGATATCTTGCTATTGCCGAGCCGGTCGATTACGTGACT
GTTATCGATACGTGGTCGGAATGTACGTCCAGACAGACGATCGAGTTCTTTGGAGGCACC
GCCGGCGTCAGATTCACTCAGTCGTGTTCGCTGGGCGAGTACCAGCAGTTGACAATTGGT
GTTGCTGATGAGACTGTTGGAGGAGTCATTCAGTACATGCGACCCAGTCAGTTACAGGGT
GAGGATTTTGGATTTATCTAGACGATGACGAGAGACAGGGGCCGAAAAGAGTGACGAATA
AGAAATGTCGTCGACTATGACGACGACGAAGATGATGTGTACGATAGGATGATGTCTGAA
GGAGACCCGTATATATGTTATTTATTGAGTATAATACTAATTGAAGGGGTGGATTACGAG
TGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E26191g_CDS-001

Protein length: 527 aa.
Product: Conserved hypothetical protein

>YALI0E26191g_CDS-001 MDWQPGYPSEPFGAYMEPLDPPYQVPVIPQDIFDDLGDLDTTSSHDTEMDLDMDMGPPSH
YMRDVAIRESAAAEGVDEDRPDCFFKFLEEEFRQGTLSSELYQRSVYKTVEFPDTVTPDV
LCEHPILDKQGLEWGTLFESSRRGSFLIPDGVCESVATHKALVRKLRYQRYAAYRPPPSA
SPTIQGFEHSLMAFQRCFTNPKPHLFHFQLRNLMYPVSATQVFYNANHMDDFQVDMLNPE
TGEQTVAISPEMCDPSLQQLRVSALAANRNVVMLGSTKGVFVVKPLAETSSSEKKSFLSS
GMISSGNELQVNYISLLSSSALISGNDNVLRTLDLNTLKAKDSITLNYAANATAFLPGSE
NVCVMACDSQESHVYDSRSGKLQMSLQGHTDFGFACAWSPDGKTVATGNQDGTCRLYDIR
GASNQCIGAVSGKLQAAIRSVDFDASGRYLAIAEPVDYVTVIDTWSECTSRQTIEFFGGT
AGVRFTQSCSLGEYQQLTIGVADETVGGVIQYMRPSQLQGEDFGFI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG