YALI0E25872g

Overview

Description weakly similar to uniprot|Q07623 Saccharomyces cerevisiae YDL213c NOP6, similarity to hydrophilins involved in the adaptive response to hyperosmotic conditions
Locus type CDS
Locus tag YALI0E25872g

Location

Species Yarrowia lipolytica Positions 3073196..3074152
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 957 (nuc.)
Previous locus YALI0E25850g Next locus YALI0E25894g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E25872g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E25872gYALI0E25872g_mRNA-001YALI0E25872g_CDS-001

Nucleotide sequence

 

>YALI0E25872g
ATGGGATCCAAAGACAAGAGCAGCAAGAAGCAGGCCAAGGTGGTTGACGAGGTGACTGAC
GAGGTGACTGACGAGGTGAAGGCCGAAGAAACGGTCGATATCAAGACAAAAACTGACGAG
ACCAAGTCTGAGAAGAAGGATAAGAAGGACAAGAAGGCCGATGAGAGCAAGACTGAAGAG
AACAAGACTGAAGGTAAAGCGGCTGACAAGACTGAGTCTGAAATTGACATATCGAAATTA
TCCAAGAAGGAGCGAAAGGCTTTGGAGTTCAAGAAGACCAAAAAGAAGATCGAGAAGGGA
GAGTTAACGGTGGAGGCTCTTAAGGAGGAGAAGAAGGAGAAAAAGGAGGCCAAGAAGGCC
GAGGAGGAGGAGAAGAAGGGTTCCAAGAAGCGAAAGCGGGATGGCGAGAACGGCCCTGCT
GCCAAGGCGGCTCGATTTATTCTTTTCTGTGGTAACTTGCCTTATGATATCAAGGAGGAG
GTGATTGCTGATCATTTTAAGACCTGCACTCCTAACAAGATTCGAATTCGAGATGCCAAG
GGGTTTGCATTCCTCGAGTTTGAGGGCGACGACGCCTCCAGACGGATGAACGTTGCTCTC
CGAATGCATCACTCTACTCTTATGAGACGAAAGATCAACGTGGAGTTGACTGCAGGAGGA
GGAGGCAACTCATCCAACCGACGAAACAAGATCCAAGAGAAGCGACAGAAGCTGGACGAC
GAGCGGTCGGAGCGAATTGCTAACGAGGAGAAGGCCAAGGCTGAAGCCCAGGCCAAGGCT
CGAAAGGACGAGAAGAAACAGAATCTGGCTTCGGCCCACAAGAAGGCCCACAAGGAGTTT
GCTCCCCAGACCAAGAAGCCCAAGACCAGCACTCCCGGTGTCCATCCTTCTCGACAGGGT
CTGATTCGGTAGAATAGAGGAATAGGCATATAGATAATGGACATAATGGAATGGTGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E25872g_CDS-001

Protein length: 304 aa.
Product: Conserved hypothetical protein

>YALI0E25872g_CDS-001 MGSKDKSSKKQAKVVDEVTDEVTDEVKAEETVDIKTKTDETKSEKKDKKDKKADESKTEE
NKTEGKAADKTESEIDISKLSKKERKALEFKKTKKKIEKGELTVEALKEEKKEKKEAKKA
EEEEKKGSKKRKRDGENGPAAKAARFILFCGNLPYDIKEEVIADHFKTCTPNKIRIRDAK
GFAFLEFEGDDASRRMNVALRMHHSTLMRRKINVELTAGGGGNSSNRRNKIQEKRQKLDD
ERSERIANEEKAKAEAQAKARKDEKKQNLASAHKKAHKEFAPQTKKPKTSTPGVHPSRQG
LIR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG