YALI0E25740g

Overview

Description similar to uniprot|Q07729 Saccharomyces cerevisiae YDL238c
Locus type CDS
Locus tag YALI0E25740g

Location

Species Yarrowia lipolytica Positions 3051646..3053045
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1400 (nuc.)
Previous locus YALI0E25718g Next locus YALI0E25762g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E25740g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E25740gYALI0E25740g_mRNA-001YALI0E25740g_CDS-001

Nucleotide sequence

 

>YALI0E25740g
ATGACTGCTTCAAACACCACAGTTTTTTTCGGAGCCATCGTCAATCCCGCCAGAAGAGCA
CTTGAATACCTGCCCCAAGCTGCTATCGGTGTCAGGGAAGGGGAAATCGTCTTTTTCGAC
AGACATGCTGAATCGGCTTCGGCGTCTGCTGCCACCCACAACATTAAGAACTTCGACACG
GTGGACTTGTCGAAAACCACCTCGTTCCTTTTCCCCGGTTTCATCGACACTCACATTCAT
GCGCCCCAGTACCCCAACAGCGGTATTTTCGGCAAGACCACACTGCTAGACTGGCTGACT
ACCTACACCTTTCCCCTGGAGTCGTCTCTCAAGGACCCCAAAATCGCCCAGGACGTGTAC
TCCAGGGTAGTCAAGAAGACTCTCGCCAACGGAACTACAACGGCTGCTTACTACGCCACT
GTCCACGTGGAGTCCACAAAGAAACTGGCTGACATTTGTCTGTCTCAAGGTCAGAGAGCA
CTTGTGGGAAGAGTGTGCATGGACCAAAACACTCCTGATTACTACAGAGATGCAAGCGTG
GAGGAGGCCAAGAAGAGCGACCGGGAAGTTGTTGAGTATATTCAGTCTCTTAACAAACCC
GATCGCATCCTCCCCATCATCACACCCCGTTTTGCGCCCTCTTGCACTGGTGAAATCATG
TCCTGGCAGGGAGACTATGCCCAGAAGAACAACCTGCACATCCAGACTCACATTTCTGAA
AACAAGGGCGAGATTGCCTGGGTCAAGGAGCTGTACCCTGCTTGCAAATCGTATGCAGAC
ACATACCACCAGCATGGACTGCTGACAGAAAAGACGCTTCTGGCCCATGCCATCTATCTG
ACCGACGAAGAACTCAACCTGGTGGAGCAGCAAAAGTGTGGACTTTCCCATTGCCCCATT
TCCAACTCGTCGCTGACATCAGGCGAGTTCCATGCTCGAAAAATTCTCGACAGGAACATT
CCCTTTGGTCTGGGAACCGATGTTTCTGGAGGTTACGCTCCTTCCATTCTCAGCACAGCC
AGACACGGTCTTCTGGTGTCTCGTCACGTGGCCATGAAGTCCGAAAACGACGCCGACAAG
CTGTCTGTGGATGAGGTACTGTACTTGGCCACTCTGGGTGGCGCCGAGGCTCTCAAACTG
GACTCAAAGATTGGTTCTTTCGAGGTGGGCAAGAAGTTCGACGCCCAGCAGATTGATCTC
GAGACTAACGGTTCTCCTGTTGACATTTTTGACTGGGAATTGCCTATTTCCGAGGGAAAC
AAGCTCGAGAACCTGGTGCACAAGTGGTTGTTTAATGGAGACGACCGAAACACTTCTACT
GTCTGGGTCAACGGAGACAAGGTGGTGACCAAGTAGATTGTTTAGATGATAGATTTTGAT
AGAATATGAAGTAGTCTTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E25740g_CDS-001

Protein length: 452 aa.
Product: Guanine deaminase, putative

>YALI0E25740g_CDS-001 MTASNTTVFFGAIVNPARRALEYLPQAAIGVREGEIVFFDRHAESASASAATHNIKNFDT
VDLSKTTSFLFPGFIDTHIHAPQYPNSGIFGKTTLLDWLTTYTFPLESSLKDPKIAQDVY
SRVVKKTLANGTTTAAYYATVHVESTKKLADICLSQGQRALVGRVCMDQNTPDYYRDASV
EEAKKSDREVVEYIQSLNKPDRILPIITPRFAPSCTGEIMSWQGDYAQKNNLHIQTHISE
NKGEIAWVKELYPACKSYADTYHQHGLLTEKTLLAHAIYLTDEELNLVEQQKCGLSHCPI
SNSSLTSGEFHARKILDRNIPFGLGTDVSGGYAPSILSTARHGLLVSRHVAMKSENDADK
LSVDEVLYLATLGGAEALKLDSKIGSFEVGKKFDAQQIDLETNGSPVDIFDWELPISEGN
KLENLVHKWLFNGDDRNTSTVWVNGDKVVTK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG