YALI0E25443g

Overview

Description highly similar to uniprot|Q6CHJ4 Yarrowia lipolytica YALI0A08195g
Locus type CDS
Locus tag YALI0E25443g

Location

Species Yarrowia lipolytica Positions 3034058..3034522
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 465 (nuc.)
Previous locus YALI0E25421t Next locus YALI0E25465r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E25443g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E25443gYALI0E25443g_mRNA-001YALI0E25443g_CDS-001

Nucleotide sequence

 

>YALI0E25443g
ATGCTTTTCAAGTCCCTCTCCATCCTCACCGCTGCCACTGCTGCTCTTGCAGCCGACCAG
TACACACTCAAGGCCGCCATTGGCCCCGGTGCAACAGGTCTCAAGCCGCTGCAGCTCCAC
GGAAACAACATTGTCTACGGCCTGACCACGGGCTACTCGGACTTCCGAGCCGAGGACGAC
GGAAACACCATCAAGTTGATCGCCCAGGGCTTCCCTGGTCTGTCTCTAGATGTTGCCCAG
GACGGTGAGCTCATTTTCAAGTCTCCTCCGGAGCCCAAGGAGGGCTTCTCCTTCAAGGGT
GATGGCCTCGTCAAGGACTTCGAGTTCAACGACTCCCAGGAATTCTACTCCTGTATCGAC
GAGACCGTGGGACCTCTTCATCCCCCGATTGTCTACGTCAAGACCGGCGACAAGTACGGT
TGCAAGAATCCCGTCAAGTTCACCATTGCTGCAACCAAGGAGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E25443g_CDS-001

Protein length: 155 aa.
Product: Hypothetical protein of a 11-member gene family, conserved in the Yarrowia clade

>YALI0E25443g_CDS-001 MLFKSLSILTAATAALAADQYTLKAAIGPGATGLKPLQLHGNNIVYGLTTGYSDFRAEDD
GNTIKLIAQGFPGLSLDVAQDGELIFKSPPEPKEGFSFKGDGLVKDFEFNDSQEFYSCID
ETVGPLHPPIVYVKTGDKYGCKNPVKFTIAATKE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG