YALI0E24585g

Overview

Description weakly similar to uniprot|Q6CFJ3 Yarrowia lipolytica YALI0B06490g, protein with a Myb/SANT-like DNA- binding domain
Locus type CDS
Locus tag YALI0E24585g

Location

Species Yarrowia lipolytica Positions 2929723..2931709
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1987 (nuc.)
Previous locus YALI0E24563g Next locus YALI0E24607g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E24585g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E24585gYALI0E24585g_mRNA-001YALI0E24585g_CDS-001

Nucleotide sequence

 

>YALI0E24585g
ATGAGCATGGATACCCGTAAAAGTGATACAAAAGAGCTGAGTCTGGTCGAGATCGTGGAC
TTGGTGTGGACCTCTACCGAAGAAATTGGTCAGGATCTCAAACAGAAGGGTGAGCGACTT
TCAAAACACTACGCCGAACAGCTGGAGCAAGCTCTGACCACTCCTGTTCTCGCTGTTCCA
TCTACAAAAGAACAATGCATAGAAGCTACTCGGGATCTGAAGCACAAATACAACAAACTC
GTGGAAGAATTGCGGCCGTCACGTGACTCATTCCAACTGAGTCTCAATCGGCATGTGGCG
CTGCTGAAACGGGTGGACCAAATGAGCCGACAGTTCTCGCGCAAAGTCAGGAAACAGACG
GAGAAGGACAAGTTTTTGGGCTATCAGGATCGTGCACTAGATTCGCTTTCTTTTTTCTTT
GACAGAGCTTCACGTGACGATTTGGATTCGGAGACACTACAGAAGTGTCTTCAGGAGATG
ATGGAGGGACAGGATGAAGAGCTCAGGGAGTGGTACTTTATGGAAGAGTTGAGTCGGTTT
GGGAGACACGTGACAGAGAGCTTGAGGCCTAAGCCAGATGTAATCATTGAAGACAAAGTG
GTGTCTTTGTCTCGACGTTTGGAACTCTCTCCAGAATGCATATCTCTTGTATACTCTCAC
TGTGACCTTGAAACGTGCGTCTCATTGCGTCAGGTCAGTTCCGCATGGTACAAGGTGTTT
GGGCAAATTAACCACATCTGGCGGTCTAAGATGCGCGAGCGGAACCCATTTATTGAGCCA
GGAGACGCCGATATGAAAAGCTATGCCGACTGCGTGTTGGTGTTTGTGGCTCGACTCAAA
TGGCCCACCGTAAGCAATCTGAACGACATGGAGGTTTCTGGAGAGCCAGCAGAGCGAAAT
AAAGTGGTTGGATTCGAGCTGGGACTCAATGAGAAACTTCCCAGTAACTTTACAGGTATG
ATGCCGTTCGAGTCTGGGTGTACAGTTGCCTGTGATCATTTCTTTGCTCTGGCAGCATGG
GAGTCTCAGGAGTTCATTCGAGATTTATGGGACCTTAGCTCGCGTCCAAAGGATGAACCA
TACGAGGTGATTGGAGTTGGAGAGCATGGAACTGTTGTCAAATATAGAGACATTGAAGTG
ACGCTTCCCCCGTCGGTTCGCCCAGAAGATATAGTTCCGTTCACAGGGCACAATACGCCT
GTGCATCTTGGTACTATGATCATTACAGTGGAGTTGCTAGACGGGAGGATGATTTCTATT
CCACGAGATGATCCGCATTACGAACACGGATATATTTTCAACGCGCCTGGAGCTCGTCTT
TTTCAGATTGGAAACGTGCATTTCGCGAGAGAGTCTCCTGGTTTGATCCACAAGAAGGCA
GTGTACAGGTACAGGTTTGCGGACTTTGAGAGTCGGAAAATGATTGAGTATGGAGCAGGA
AGACATGTATATCCCGTCGCAGCCTACAATGGTTGCATCTGGTGGCATCTGATGGCTGTT
CCTAACTCTTTGGTGCCCACATTCGTGGATCTCAGGACTCCCGAAAAAATCCACTTTCAG
CCAAATAGAGCCATCTGTGGAGTGTCTGCGAAGCTTTTTGAACAGAGCTTTAGAGATAGA
GACACGAGCCAGTTTGTTGTTTCTATAACGGACATTGGTATTCAGGTGGTGGATCTCGAT
AGAGGAGTGATCACGGAGGTGACTGGGCCCAGTGACAAACCTGCTGCTCGTTTCTTTCCA
GGCTATTGGAACGGCAAATTCATGGCAAGGTGTATGAGCGAGGTCGTAGTCCAGGCAACG
ACGGAGCTGGTGCTTCAGGAGCACGGCGTTCCAGAGGAGGAGTGGAGGGTGTAATTCTGA
CCTTTTGACACGAAGTGCTCTGATCTGTCTGCATGTTGGTAGCTACATACAAGACAAGTA
TCACAAGTACAAGGAGCAAGGCAGAGTTTATAGGGAACACGATGCCCACCGGGGCTATTA
CTTGTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E24585g_CDS-001

Protein length: 618 aa.
Product: Hypothetical protein of a 30-member gene family, conserved in the Yarrowia clade

>YALI0E24585g_CDS-001 MSMDTRKSDTKELSLVEIVDLVWTSTEEIGQDLKQKGERLSKHYAEQLEQALTTPVLAVP
STKEQCIEATRDLKHKYNKLVEELRPSRDSFQLSLNRHVALLKRVDQMSRQFSRKVRKQT
EKDKFLGYQDRALDSLSFFFDRASRDDLDSETLQKCLQEMMEGQDEELREWYFMEELSRF
GRHVTESLRPKPDVIIEDKVVSLSRRLELSPECISLVYSHCDLETCVSLRQVSSAWYKVF
GQINHIWRSKMRERNPFIEPGDADMKSYADCVLVFVARLKWPTVSNLNDMEVSGEPAERN
KVVGFELGLNEKLPSNFTGMMPFESGCTVACDHFFALAAWESQEFIRDLWDLSSRPKDEP
YEVIGVGEHGTVVKYRDIEVTLPPSVRPEDIVPFTGHNTPVHLGTMIITVELLDGRMISI
PRDDPHYEHGYIFNAPGARLFQIGNVHFARESPGLIHKKAVYRYRFADFESRKMIEYGAG
RHVYPVAAYNGCIWWHLMAVPNSLVPTFVDLRTPEKIHFQPNRAICGVSAKLFEQSFRDR
DTSQFVVSITDIGIQVVDLDRGVITEVTGPSDKPAARFFPGYWNGKFMARCMSEVVVQAT
TELVLQEHGVPEEEWRV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG