YALI0E24519g

Overview

Description similar to uniprot|O74971 Schizosaccharomyces pombe Apoptosis specific protein homolog, APG5/YPL149w homologue involved in autophagy and nutrient starvation
Locus type CDS
Locus tag YALI0E24519g

Location

Species Yarrowia lipolytica Positions 2920401..2921823
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1423 (nuc.)
Previous locus YALI0E24497g Next locus YALI0E24541g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E24519g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E24519gYALI0E24519g_mRNA-001YALI0E24519g_CDS-001

Nucleotide sequence

 

>YALI0E24519g
TTCACAAACACACCCACAGTACAAAAACTCACCTCCGGATCGAATTGGCGGAGTCAGCAC
AGCATGTCGGCGACAATCAAGCAGCTGCGTGAACGGTTCTACGACGGATCCATCAGCGTC
AAAGTCGTGCTCAGTATTCCCCACGACAAGCTCTTGGAGTCCCAAGTGTATTACGTGAGT
ATGGTACACAACGCATCACCGTTCGATTGATTGACTAATACAGATACAAATCCCGCGGGT
GGCGTACTTGCACAATTACGTGGAGACGATACTGAGGTACTTTGGGCGATATCGCGACGA
GGATGACTTCGAAACCTGGTTCGAATTTGAAGGTGTTCCTGTGAAATGGTGAGTTGAGAA
GATGGGAGATAAACGTGGTTTGGTGCTGGATGAAACAGCGACATATGGTACGGTAGATAG
ACTGACGGGCTGGTTTCGAAATGTCTGTATTCAATTACCAGAGGGTACGTTACTCGTGCT
CTGTTGTTGCGCTGTTGAGCAGCGGATTGGGGTCACCACCTTCTCTAGTGAGTGATCATA
GCTTATTGCAATGACGATTCAACATGATACAATCATCATAGGTCTACAAAATGCCCTTCT
GGTACGTTCGTGTTATTCGGATATTCATATTGGGGCACCTACATGAAGTCACTCGTTCTG
AGCATCCTTTTGCTGCTGACCGGTCGTGACCTACTGTCACTCACTACCGTGTACTAACTA
AGGAACTGGCCAGTAGGTCTCTCCTACGATCTCCTCACTGGCCTAGACCCCTCCAACCCT
GACACAGTCCAATCGCCGTGGATCCTCACTCTACAAGTGGATCAGAAAGAAGAGTATCCG
AAAGGCTTGCTGCTTCGAATCCCCACTAAGCAAACGCTCAAGGACTACTGGATCCACCAG
CTCAAGGAGGCATGTGTGTCACGGGACGGAAACGCCAACCGGGTCATGAGCCTGTCTAAC
GCCAACTCACAGAAGATGTGGGACTCACTCGTATCCCATGACTTTAAGACATTCTGGTCC
ATCATGACGACCATTCTGCCTCGCGAAAAGGACTCTGGGGCTATCAGAAGTCTCCCCATC
AAGGTCTACTTGCCCATGAGTAACCAGTGCATTGCCGCTATTGTCAAGCCCGAAACCGAC
GACGGGAAGCTGACGACTATCGGCCAATCTTTGCATTCCCATCTGCCGACCTTCTTCCCC
TCGGAAACCAAGCCTGTGGTAGCCCGAGCTGTGGTTCATGGTGTGGAGGTTCCGCTGAAT
GCCGTACTTGCTAACCTCTATTACATGGCGATGTATCCGGACGGCTTTCTGCACATTTCT
CTTGTGATGATCAATTAGCATTGTATATAGGTGGTGGTCGCGGGGAAGGAGCGACTAGCA
GCACGACTACCACATTTTATGAGTAATATAACTATCTTATGAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E24519g_CDS-001

Protein length: 284 aa.
Product: Apoptosis specific protein homolog, putative

>YALI0E24519g_CDS-001 MSATIKQLRERFYDGSISVKVVLSIPHDKLLESQVYYIQIPRVAYLHNYVETILRYFGRY
RDEDDFETWFEFEGVPVKWNWPVGLSYDLLTGLDPSNPDTVQSPWILTLQVDQKEEYPKG
LLLRIPTKQTLKDYWIHQLKEACVSRDGNANRVMSLSNANSQKMWDSLVSHDFKTFWSIM
TTILPREKDSGAIRSLPIKVYLPMSNQCIAAIVKPETDDGKLTTIGQSLHSHLPTFFPSE
TKPVVARAVVHGVEVPLNAVLANLYYMAMYPDGFLHISLVMIN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG