YALI0E24453g

Overview

Description some similarities with uniprot|P40344 Saccharomyces cerevisiae YNR007c AUT1 essential for autophagocytosis
Locus type CDS
Locus tag YALI0E24453g

Location

Species Yarrowia lipolytica Positions 2914309..2915609
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1301 (nuc.)
Previous locus YALI0E24431g Next locus YALI0E24475g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E24453g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E24453gYALI0E24453g_mRNA-001YALI0E24453g_CDS-001

Nucleotide sequence

 

>YALI0E24453g
ATGGAAGCACACAAAGGGAAGCAAGATATTTTCATAGTACAAGTACTTATAACCCCGACA
TTTGTCGAATTAAACCACATATATCCTCCCATTCGCCTTCTGTCACCTCCCTCTATCTCC
TCCAACCCGTCGATAAAGTTTGATAAGACGCAGGCTCCACCAACTCTGTTTATTTATATT
GCCTCCTACAATACACCAGACTACCAGACAACACTACACAAATCCACCATGCTACACGTC
CGAGCAGCCGCATCCAGCTTGCGCGAGTACCTCACGCCCGTATCTAACACGTCGACGTTC
CGAACGACCGGCGAAATCACTCCCGACGAGTTTGTGAAGGCCGGCGACTACCTGGTCGAA
AAGTTCCCCACGTGGAGCTGGGCGTCTGCTAGCAAGTCCAAGGTGCGAGACTTTTTGCCA
CCGGACAAGCAGGTGCTGGTGACCCGTCACGTGCCCAGTCACGTGCGAGCCTCGACCGTG
AGCGGACCCGTGACTCTGGGAGAGGAGGAGGACGGATGGACGTCGTTTGGAGTGGCCAAC
ACGAAGGACGCAGATGGAGACGACACAGAGGAGATTGCTGAGATTGCCGATTCGGACTTT
GAGGAGCTAGACGACGATGACGATGATGCAGCTGAGGCTCCTGCCACGGCTACCGACCAC
AGAACTTACAATCTCTACATTGCATACTCTACGTCGTACCGGGTGCCCAAGATGTTTCTG
TCAGGCTACTCTCCCGAAGGATCGCCTCTGACGCCCGAAGATATGTTTGAAGACATTATT
CCCGAATACAGAGACAAGACAGTGACGATTGAGCGGCCCACGTTCCAAGATAACATCACC
ATGGTGGCCATTCATCCCTGCAAGCATGCCAACGTCATGAGAGTGCTTATGGAGAGAGTG
GAGGCCAAGGGAGATAAAGACATTACCAGGGGAGTGGCCAAACTCGGCGTGGCTGATGCA
GATGACGGAGAAGGGGAGGAGGAGTGGGAGGAAGTGGAAAACTCAGCTATGAGGGTGGAC
CAATACCTGGTCACGTTCTTGAAGTTTATCGCCAGTGTTACTCCGGGTATTGAGCATGAC
TATACCATGTCTGCCCTCTAGATGACTCAAGAATGTTGCCTCACATTTACGATACAGTAT
GTACTGTACTGTGGGAGACTGGTTGCATCTTACCTCATGGAATCTGACACTCTGCAATAC
AATCAAACTCGCTGACCTATCGCTTCATCAATAGGCCTGGCTACGAACACTCAGCAACGT
CCTGTAATTTATGTACTAACTAATGACTCTTTGTGTGGTCG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E24453g_CDS-001

Protein length: 367 aa.
Product: Conserved hypothetical protein

>YALI0E24453g_CDS-001 MEAHKGKQDIFIVQVLITPTFVELNHIYPPIRLLSPPSISSNPSIKFDKTQAPPTLFIYI
ASYNTPDYQTTLHKSTMLHVRAAASSLREYLTPVSNTSTFRTTGEITPDEFVKAGDYLVE
KFPTWSWASASKSKVRDFLPPDKQVLVTRHVPSHVRASTVSGPVTLGEEEDGWTSFGVAN
TKDADGDDTEEIAEIADSDFEELDDDDDDAAEAPATATDHRTYNLYIAYSTSYRVPKMFL
SGYSPEGSPLTPEDMFEDIIPEYRDKTVTIERPTFQDNITMVAIHPCKHANVMRVLMERV
EAKGDKDITRGVAKLGVADADDGEGEEEWEEVENSAMRVDQYLVTFLKFIASVTPGIEHD
YTMSAL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG