YALI0E24387g

Overview

Description weakly similar to uniprot|G3B0L1 Candida tenuis CANTEDRAFT_129680 hypothetical protein
Locus type CDS
Locus tag YALI0E24387g

Location

Species Yarrowia lipolytica Positions 2903147..2906698
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 3552 (nuc.)
Previous locus YALI0E24365g Next locus YALI0E24398r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E24387g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E24387gYALI0E24387g_mRNA-001YALI0E24387g_CDS-001

Nucleotide sequence

 

>YALI0E24387g
AGCACACCAACTGGTATTTGGAAAGTTGATCATTCAGCGTGCACACGACAAACCCGGGCC
ACGGAGCCAGCAGAGCCACATGGACGACCAACCTAGCATTGTGCACAGAAACGTGCTCAG
CAGCCCCGTCATTGAGCACATTTTCCAGTGTCGAAACGCCGAAGGAGTGCCGTTTCACGT
TATCCTCAGGGTGAGTAGTGAAGACGAATGACGTGAGATATCACTGCCCACCGGAACTAA
CACAGACAACCTCACTTGTCATCGCCAACCAAACACATACGCTGCCCGCCAGACTGCTAT
CGGCATGCGTCATCGAAGATAAGACCCCTGACAAGCTCTCCAGAGACCATCTTCTCATCT
GCATGTCGTCTGGAGAGCTGCTGCTGGTAAAGGTGTACGAGACGGGCGCCACACCGCAGG
TGCTCGATGCCACGACCATTTTCCCGCGCAACAAACCCAACCTCAGCGGTCTGGGAGGCA
AAATATGCGTGGACGCCTCCTCGACTTTAGCAGCAATAGGATCATTTGCCGAGTTTGTGC
TGCTGGTGGAGATCAGAGCTCTTGCCGACAAACCAAAACGGTTCTTCAAAGAGAAACACG
TGGTCTCGAGTGCCGGTGCCCCAGCCACATTCAATTCTCCACGCTCCACGGCCATGGACT
ACTGTTTCAACATGATTGCATCCACAGAAGAAGACCATGGCGTGTACTTGTCTGCATTAT
TTGTGAACGAACGACAACGACTGACTCTCGAGACATACCTCTGGCGTCCCAAATATCCCG
TCAAAACCGTCTCTAAACTCCCTCTGCCCATCATGGATCTGCCCGTCTTCCTCTTCTTCA
ACGACACAGTGTCTGGTTCCGTCATTCTAGCGTGTCCCAAGAACCTGTATCTGGTCAAGT
TCAACGACATGCTCAGCGGAGTGACCACGTTTCCTTCGTGCACAATAGACTCATTTCCCG
TGGCTCATTACAGAAGTGAAGACGCAAGCCACGTGTACATTTCATGTGAGGATGGCTCGA
TTCTGGAAGTTGTGGCTACAAACTCTACCATCAGTGTCAAAACGGTTGTCAAGACAGATG
TTGATCTTGGAAAGACGTTTATTTTGGAAGAAGCTGATGAGGAGAGCTACTTGCTGGGAT
ACGGAGGAGATGCATCTGATGGACGGCTGTTGCAGATCACGAAAAGTGACGCGAAATCGT
TCGTTATGGAGACGATAGCCTCGTTTCCCAATTGGGCACCTGCTTCCGATATCGAAATCA
TTCACGGAAACATATACGTTGCCAGCGGAGTTGAAAACACCGGCGCTCTGACCCAACTGA
ACCCTGGAAGTCGAATCACAACTCTCTACAATGAAGAGTCAGACCAATACGACACCATTT
CGAGCGTCACGTTCGGCTCTGGACTATTTCCTGTGTCCTACATTGTCGTTTCTTCGCCCA
TAAGAAGCAAAATCAGACAATCCATGTACAAAGACGCGATCAGTGAAGATCCCAACCCTC
GGTTTTGGGATCTGGCTGAAGATTGTGGGTTCGAATTTGACCAAAAGACACTGCACACTG
GTTTCACCACAAATGGGCTGTTTGTACAAATCACTCCAAATACACTGGTATTGACTGATC
TCTCAGGACACAAATGCACCCTGGACCAATCAATTGTACTGGGAAGCGTGGGACCCAACA
ATCTTCTGGCCACGGTAGGGAACGTCCCTGGTAACGATCGAAACTTGTCAGTCTACCGAA
TAGCTTCCAGTGTGAAACCTGACGCGTTTGAGCTCATCAAGTCCATTCCATTAGACGCCC
CAGTGACTCTGTTGAAGGTCATTGAAGATCACATTGTTGTCGGAACACATGATGCTATTA
ACTTCTACGATATCGAAGACCTGACAGCTGTTTCGACCGGTCTGCCATTCACACCCTGTG
ACATGCTGATCAACAGTGCATTCGAGTTGCTGATTGGATGTCGAACGGGACATTTACTGT
TCTGTTCATTCACTTCTCAGGGTGAGGTCACTGTCAACTCATACAGACAATTTGGAGATA
CCCCCGTGCGCATTACATCGCTACAATTCCAGGACTACATTCTTGTCGCTTCAGACAGCG
TGTACATTCTGAACCTGGCCAACAACTCTCCTCCTTTGCAGATTCACAACGATGACTCCT
CCAATGAAGTTATCATCGGTGAATGTCCCGTGTTCATCGGAGAAGCTAACCCCGAAACAG
CTATGTCTGTGTTTGCTTGTTTCCTGACTCCAGCTCAGCTTAAACTAGTTGATCTGGAGC
TCGCACATTCTGTAGTAGAGTTCAAAATCGAGCTTGGAAAGACGCCACGAAGACTTCTGT
ACCTCGACGACGTCAATTTACTTGTCATCACGCTCCTGGGAGAAATGGACCCCGATACAG
GTAACCATCTGGCATTTGTGGACCTGGCTACTCGAGCAGTGGTTTCTCCAAACGTGTTCA
TGGATAGACGCAAACACGGGGGCGTGACGGTCTTCTCGCGAAAAGAAGTCATCTACTGCA
TGGCCGAATGGCGACTGTCTCTCGACAGCCAGGAGTACCGGTACCTGGTTACTGGATCGG
GATACACAACATCCACCAAGGGCCGTCTGGTGATTCTCAGCTACAAGGTGAAGAACGGAG
AAGTTTCTCTGGGCAAGCAGGCAGCCTGGACTGTTCCCGAACCCGTGTTTGCTGTCTGTC
AGCTGTCCAAGAACACATTGGTGTACTCTTTCGGACGCATGATTTCCGTGGCCAAATTCT
CTGGTCCCTCCATCGAATACAAATCTGGTCCTGAGTATGAGTTCCCCAGTAAGGTGGTGA
AACTGACTGTCACGAGCCCGGGAGAAGTCATTGCCAGTACTATGAACAATGGCATCATAG
TGTTGACATACGAAGATGACAAGTTTTGCAGAGTGGCCAAAGATTCGGTCTACAGATCGT
GTCTGAACCATGGTGTGTCAGATTCACTTATTGCAGTTGCCGACAAGGAACGATGTGTAT
CGTTTCTGGCTCGCGACGACGGAATTACGTTGCTGAAACCCACGGGAAAGGTTTTCCTTC
CTTCCTTCGTGTCCAAGCTGCTCCTCTCCGACAACAAACCTGTCTGGCGCAAACAGCCGT
CGCAAATGTTCCAGAACCCGTCGATTCTGTGCTTGAGCATGTCTGGAGAAATCACCAAAA
TGTACATAATGACCAAACAGGAGAAGGAGTACTGGGACAAGGAGCTGGCGGTCATGAAGC
GCGAAAAGCTAAAGGACTCGCTTCTGGATCTCGACTCGGAAGACTTCATGGAAGATTACA
ATGGTTCTACCAACCCCATTGATTCTCACTCTGTCTCTTACGTTTCCTTCCCCACGCCTC
TTTCACCAGCTCCTACAATGTGGTCTGACTTCGATCTCAACTCCACCAACATCATTAATG
GCACGGCACTGTTCCAAATGTACTACGGAACAGACAACCCCATTATTGATGCTCTCAATG
AGATGTAACAATCGATATTACTGTAATGCATATCATAATATAGACTTGATAAATTTCTAC
ACACCATCCTTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E24387g_CDS-001

Protein length: 1118 aa.
Product: Conserved hypothetical protein

>YALI0E24387g_CDS-001 MDDQPSIVHRNVLSSPVIEHIFQCRNAEGVPFHVILRTTSLVIANQTHTLPARLLSACVI
EDKTPDKLSRDHLLICMSSGELLLVKVYETGATPQVLDATTIFPRNKPNLSGLGGKICVD
ASSTLAAIGSFAEFVLLVEIRALADKPKRFFKEKHVVSSAGAPATFNSPRSTAMDYCFNM
IASTEEDHGVYLSALFVNERQRLTLETYLWRPKYPVKTVSKLPLPIMDLPVFLFFNDTVS
GSVILACPKNLYLVKFNDMLSGVTTFPSCTIDSFPVAHYRSEDASHVYISCEDGSILEVV
ATNSTISVKTVVKTDVDLGKTFILEEADEESYLLGYGGDASDGRLLQITKSDAKSFVMET
IASFPNWAPASDIEIIHGNIYVASGVENTGALTQLNPGSRITTLYNEESDQYDTISSVTF
GSGLFPVSYIVVSSPIRSKIRQSMYKDAISEDPNPRFWDLAEDCGFEFDQKTLHTGFTTN
GLFVQITPNTLVLTDLSGHKCTLDQSIVLGSVGPNNLLATVGNVPGNDRNLSVYRIASSV
KPDAFELIKSIPLDAPVTLLKVIEDHIVVGTHDAINFYDIEDLTAVSTGLPFTPCDMLIN
SAFELLIGCRTGHLLFCSFTSQGEVTVNSYRQFGDTPVRITSLQFQDYILVASDSVYILN
LANNSPPLQIHNDDSSNEVIIGECPVFIGEANPETAMSVFACFLTPAQLKLVDLELAHSV
VEFKIELGKTPRRLLYLDDVNLLVITLLGEMDPDTGNHLAFVDLATRAVVSPNVFMDRRK
HGGVTVFSRKEVIYCMAEWRLSLDSQEYRYLVTGSGYTTSTKGRLVILSYKVKNGEVSLG
KQAAWTVPEPVFAVCQLSKNTLVYSFGRMISVAKFSGPSIEYKSGPEYEFPSKVVKLTVT
SPGEVIASTMNNGIIVLTYEDDKFCRVAKDSVYRSCLNHGVSDSLIAVADKERCVSFLAR
DDGITLLKPTGKVFLPSFVSKLLLSDNKPVWRKQPSQMFQNPSILCLSMSGEITKMYIMT
KQEKEYWDKELAVMKREKLKDSLLDLDSEDFMEDYNGSTNPIDSHSVSYVSFPTPLSPAP
TMWSDFDLNSTNIINGTALFQMYYGTDNPIIDALNEM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG