YALI0E24277g

Overview

Description weakly similar to uniprot|Q8WZK9 Neurospora crassa
Locus type CDS
Locus tag YALI0E24277g

Location

Species Yarrowia lipolytica Positions 2891252..2895938
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 4687 (nuc.)
Previous locus YALI0E24255t Next locus YALI0E24299g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E24277g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E24277gYALI0E24277g_mRNA-001YALI0E24277g_CDS-001

Nucleotide sequence

 

>YALI0E24277g
TTGTAGTGGACTTTGGAGTTTTAAGGACGGCTCTGTCCGAGAAAACCACGGGTACTTTGT
CAACTCACTTTCTGGCGTAGGAAGTCGACCTTTTTCAACTCTTCATCTCCGCAACTCGAC
TCTTTCGTCCCGTCCGACCAACCCCACACCCCATACCTCGTCCCCTACAACTGACGAGGT
TTTGTATCGACCAGTGATAGACAACATCAAACGACATCAAACGACACCTGACAGCCTCAG
ACACGACAGATATATATCTCGACAATCTGATAACGACTCAGACCCCGTTCCATCGACGCT
TTTCCTCGCCTCACTAAAGTGATTGTGCTACTTTCTGTTCCCTTTGCCTTAACCCTTAGC
ACCTAATACTATCATTGTCGTTTCGAAAGCCCCCACATCTGTTTTCTTTTTGATCTTTCT
GCTTGTTACCCAGTTGATTTGTTGTCATACGTGAGTACCCACTGTCCCCCAAGCCCTCAG
ACTACTACGTCTCCTCCGAGAGATGTAGAGGTGGCAGATCTCATGATGAAGATGAGAGCC
TTTCCATTACTTTTTATCTCAATGTTTTTTTGTCTTCTCAATGTTAGAAACCGACGCCAT
CGAATGGCGCCACTACTGTCCATACCCGTGATTACCCCCCTCCAAACCAGACTACCCTGT
TACCCGCGCCTGCCTGCTCAAAAACACACCAAGCCATCTTACACTGACCTTATATACATG
TTTCTTTTTCAGGTCGCTCTACCCTCGATACCGTCCCACCACACTTTACCCCTCTAACCA
TGTTTTTTCTTTGGCCGAAGTCCGCCGGGCTGAATAAGCCGACTAAAAAAAGTTGTGGAA
ACCTCTCTCATCAGCAGATCTGTGACTTTTACTCCTCGAAGAACGATGATAGTGCCCTTT
TTGTTTCTTTAGCTCACCAACAGCCATGAATCCCCCCCACGACCACAACGACCACATGCG
TATGGGCGACGCGCGAATGGACGACAACCGCCATCCCGAACACCCCGACTGGAGAGTGAG
TATCCCAGACAAAGGTCGACACCGTCGGTCCCAGAGTCATCCCGCAGGCTGGCCATGGTC
ACAAACGCTATCAGTCTGCATCGTCTTGCGGCAACTGCCCGAAGTCTAAATGTCCGACTT
TTTGCGCTCTTGTCGCCGTCTCAACCTGACACCTGTCAACGCTGCATGACTTTTAGGCGT
CTAGTGGCGGCCTATTGGCGACCCAGATCGTGTCAGACCGCACCCATCCGTGCCCAACCG
ACCAACAGTGCCCCCAATGCTTCCCCGACGCATCTCTGTTCCTCCCACAGCCGCAGTCGC
CGGACCCTAAACCCGGAGACAGAGACACCCTGCAGTCGAGCTCGGAGCTATCCCTGCGTG
GTCCGGTTGCAACGCTGGGATGGACGCTAGTCAAGCCAATCACCTCCGTCTTCTATGCGC
CTTCCACAGACTCTAAAGGCGCATGCATAAGGGGCTTTGTGGGTGGCATTGGCCCCGTCG
GAACCCAGCGCTACTTGTACCCCAGTGGCTAGCACCAGCGGTGGTGCACACTCGCATACG
GGCCCTACATACATACAGCAAAAGACCCGCGAGAACGTGAGCAAAAAAATATCTCTGCCA
AAAGTCGCTAACCCATCCAGCTTCCCAGCCTTAAAGGTCACCCCGGCTACCCCGTCATGC
CCCACTCGGCCTCACCCAACATCAACCACGTGCACATGAGCCTTCCACATCAGCAGCACC
AACAGCAACAGCAGCAGACACAGCAGACACAACAGCATCAGGCGCCACCACCACACCAGT
CGCCGCTCCTGCAGCAGCAGCTCCATCCACAGGGCCCTCCTCATCCGGGCCATGCGACCA
TGAGTCAGCCCCCTTCCCAGCAACAAGCCGCCTCCCGACTGCCGCCGCAAGGACCGCCTC
CCCCGGGACCCTCCAACCCGTCGCCTGCAGTCTCTTCCTTCTACCAGGCGTACACTGGCG
GGCCTCCCCATTCCGGCGGGCTGTACGAAATGCACAAACGACCGTACCGAAAGCGGCGAA
AGGACCCGTCGTGCGACGCCTGCAGGGAACGCAAGGTCAAGTGCGACTCGGTGGACTTCT
CGTCGTGCTCTGAGTGCGTGACCCGACAGATCAAGTGCCAATTTTCCAAGTCCAGCATCA
AACGCATCTCGTCCATAAAACAGATCAAGGGCCTGGAGGGCTCCATGCGCCAAATGCGTG
ACCAGCTGCTCGAGTTCCGGGCGCTGGCAGACCATCTGAAAATCGACTTGCCCTCAAACC
TGCGCCAGGTCGGACCTCTCGACCTGCCCATGCTGTTTGAGGACGACGGCGACGACTCCC
CCAGATCGCCTCCCTCTGGCAGCGAAAACGCGAAAGAAACAGAGTCGCCCCGAGTGTCGT
CTCTTTCCCATACGCCCCCTTGCAATTTTGATTTCAGAGTCAACCCCAATGACAACATGA
CGTACGCCAACACCACCACCACCCGTGGTGAAATCAAAATGCCCAGCTACAATCCAACTA
CCACCCAGACAAAGACCAACGCCGAGGCCATCTCGCCCGTGGGTCTGCCGGAGGTGCAGA
AGACGCTCGAAAAGTACGGATTCGACAAGCCCATCTACTACCCCTGGAAGTGGCGATCTC
GAAAGACTGTCGGCGACCTCATTGAAGAGGGCAACATGCCCGAGCTGCCCAAGTGGGAAA
TCGCCCAGCTGTGGATGCAGGTGTTCCACGAAATGTACCAGCACTGGGTGCCTGTGGTTG
TGTGGCCTGACTTTGTGGAGCGAGTCTGTATTCTCTATGGACGAATCCACAAGCCTGCGG
CTGAGCGAGAGGCTGCCAAAAGAGCTCTTCCTGTGTCTTGGCTCGGTATCTTTTTTAGTG
TTCTCTGTCTGGGAGCACGAGATAATATGGTCAAGGGCTACTCGATTCGCAAGACTGGTT
TTGAGTACCTGGAGAACGCCAAAAAGTGCATGAACAGCACTTATGACGACGGCTCGGTAG
AGTGCATCCAGATTTGTGTCATGCTTTCCTTCTTTCACCATGAGCGTGGCCACGTGTCAG
TATCTCGAGTGTGGATCCGTCACGGAGCTGAGCTGTGTGAGGAGTTTGGTCTGCTGCGTC
TGTCCGAGAGCGACACCGAGGTCGACCCTGTTATTCGACACGCCAAGTCTCTCATGATCT
GGACCCTGTACGCTGTTGATCGACTGCATTCTCTTTACACTGGCCGTTCTTTGGCTATTA
CAGACTTGGAGAGCTCCTCCCTTCATCATCCTTCTCCGTTCCTGCTCCGAGGAGACTACT
CTACTCTACGGCGACTGGAGAAGCAGGGTCCCATGACCACGGAGCAGCAGATCACCCATC
TGGTGAACGACTTGCCCATCATCAAGTCCGACTCCTCTTCCGATGAGTCACTTGTGGAGC
CGGACGATCTGCCTACCACCCTGGACACCCGAGACTCCACTGCTCACTCCAAGGGCCAAA
ATAACTCCACGGCACTGTACTGGCTGGAATCCACGCAGATGTTCAACGCCTCTGCACATA
TGTTCCGGTTCTCTTCTGTTGTCGGAGCTGCCATCCAGGCCTCCAACGTGCTTGCTCCTG
CCTCTCTGGACCTGTTGGAAAAACAGGCTGCTGCCATTGACACAATGTGGCCTCAGAAGG
GTCAGATGGATGAGACGGGACCTCTCAACCACGTCTATGTGCCTCCCGTCTTCTATCTCG
AGTACCAGAAGCTCTTCTTCCGGCGTCACAATCTCACACCCCATGCTCCTGCTCATCTTC
GTCAGCGTGCTGTCACAGACTGTCATTCCACATCACAGCAAATTTATCGATACCTTCGAC
GAATCATATCTCATTTGACTCCTGCCGAGCTAGCTGCTCCCGCTGTGTTTGCGGATGACG
CCTCCGGTGTGCCTATGGGCACCAGAAACTGGCGAGAGAAGGCCATGGTTGTCAACTTTG
GTCACCTGCATATCGTCATTGCCTATGCCGTGGCCTACCTGGTCTCTTCCGGGTACCATC
TGCGGGCCATCATCATGCTGGAGTTTGTCAAGAACCTCTGCAACTACCAGAGTGATCGGG
CTGTGTGTGGCATGCGAATCCTAGGCTTCACTCGGCACTGGAGTCGTCGTCTGGCAGCCG
TTGGAGAGAATGCCATCTTCCAGGACGAGGAGGCTCTTGCTCTCCTTTCTCTGGACATGC
AGTCAACCTACAAGTCTGCGTGGGTGTGGGACATGAAGGAGGAGCGTAAGAACTTCATGG
AGTCGCAGCTGGACATTTCCGACATGAAGCCCCTCAAGCGTCACAAGGGCTACCATAGTG
CCAAGGACAAGGTGGCTGTGGGTAACAAGCCTGCATCTATTGCTGCCGAGGCTCTCATTA
CCCCTCCCGACTCCAAGAGCCCTCCCGCGTCGCCGCCTGCCCCTACACATTCAGTCGAGT
CTCCCTGGGACGAGTGGGATATTCTTCGGCAAGAGATTCTGGCTCTCGGCAACCTGACCA
AGTCCAAGGACACTGAGGAGGACCAGGATCTGTTGCTCAAGATGGTTCCTGAGATGGCTT
CTCGTCTCAAGAAGCGGCCCTCCACAGAAACTGCAGAGACAAACAAGAAACCCAAGGCTG
AGGATCGACGAATGTCCATCTCTAGCATCATTTAATTATTTATTTGCATTTTTGACTATC
CGCGCAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E24277g_CDS-001

Protein length: 1035 aa.
Product: Conserved hypothetical protein

>YALI0E24277g_CDS-001 MNPPHDHNDHMRMGDARMDDNRHPEHPDWRLPSLKGHPGYPVMPHSASPNINHVHMSLPH
QQHQQQQQQTQQTQQHQAPPPHQSPLLQQQLHPQGPPHPGHATMSQPPSQQQAASRLPPQ
GPPPPGPSNPSPAVSSFYQAYTGGPPHSGGLYEMHKRPYRKRRKDPSCDACRERKVKCDS
VDFSSCSECVTRQIKCQFSKSSIKRISSIKQIKGLEGSMRQMRDQLLEFRALADHLKIDL
PSNLRQVGPLDLPMLFEDDGDDSPRSPPSGSENAKETESPRVSSLSHTPPCNFDFRVNPN
DNMTYANTTTTRGEIKMPSYNPTTTQTKTNAEAISPVGLPEVQKTLEKYGFDKPIYYPWK
WRSRKTVGDLIEEGNMPELPKWEIAQLWMQVFHEMYQHWVPVVVWPDFVERVCILYGRIH
KPAAEREAAKRALPVSWLGIFFSVLCLGARDNMVKGYSIRKTGFEYLENAKKCMNSTYDD
GSVECIQICVMLSFFHHERGHVSVSRVWIRHGAELCEEFGLLRLSESDTEVDPVIRHAKS
LMIWTLYAVDRLHSLYTGRSLAITDLESSSLHHPSPFLLRGDYSTLRRLEKQGPMTTEQQ
ITHLVNDLPIIKSDSSSDESLVEPDDLPTTLDTRDSTAHSKGQNNSTALYWLESTQMFNA
SAHMFRFSSVVGAAIQASNVLAPASLDLLEKQAAAIDTMWPQKGQMDETGPLNHVYVPPV
FYLEYQKLFFRRHNLTPHAPAHLRQRAVTDCHSTSQQIYRYLRRIISHLTPAELAAPAVF
ADDASGVPMGTRNWREKAMVVNFGHLHIVIAYAVAYLVSSGYHLRAIIMLEFVKNLCNYQ
SDRAVCGMRILGFTRHWSRRLAAVGENAIFQDEEALALLSLDMQSTYKSAWVWDMKEERK
NFMESQLDISDMKPLKRHKGYHSAKDKVAVGNKPASIAAEALITPPDSKSPPASPPAPTH
SVESPWDEWDILRQEILALGNLTKSKDTEEDQDLLLKMVPEMASRLKKRPSTETAETNKK
PKAEDRRMSISSII*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG