YALI0E24101g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E24101g

Location

Species Yarrowia lipolytica Positions 2862470..2866865
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 4396 (nuc.)
Previous locus YALI0E24079g Next locus YALI0E24111r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E24101g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E24101gYALI0E24101g_mRNA-001YALI0E24101g_CDS-001

Nucleotide sequence

 

>YALI0E24101g
ATGTCGCGATTCTGGAAGAAAAAAGACAAGGCCAAGGACGACAACCATCTGTACCTGGGC
GACGAGGACGACTACGGGCCACAGATCCCCACAAACGCCTCCTCCACCGCGTCGTTCAGC
GGCCCACAGCACCCAGCCAGTCATTCGTCTCCGTCTCTTCACCAACCGCAGAACGGCGTC
GGACTGGGCGTCGGCGTCCAGCCTGAGTACGGCGGGCCCGGCAACTTTGGCCCCAACGAA
GGACACGGCTACGGACCGGGCCATTCGCCGTACGGACAGTTCCAGGACCCGCCACAGCAC
CAGCAGCAACAGTATGGAAGCGATCCGGGAACCCCGGGAGGCCCCGACGCCCACCCGATC
GACTCCATGCCCGAGCTGGCGTTTGAAAATCTCGGATCCAAGCTCTCAGGCTCCGGCAGA
ACCATGTCCATGAGCTCGCAGGGCGCGCCAGCGGGCCTATCCATGGTCCTCAACCAGAGC
GACACAAACCCCATTATCCCCACGCTACGTCACCCCTCGCAGACAGCAGAGGGACTTGCC
GGATCGGCTTACAGAAAACAGGTAGCTGCCCAGCGCCAAAAACTGCAGCAACAGGACGCC
CAGGCGTACCACGACATTGGCTCGTACCCACATCAGAGCTCCCATCTGCAGCAGCTACCA
CCCCCCAAGCAGCGATCCGGACCCCAGCGGTTCCACATGGGTCCTGCAGGCCCCGTGCCT
CCCGGATCGGACTATTACATGCCTCATCGGGCATCCGGAGCACCCATCAACGGCCCTCCG
ATCGGAAAACAAACCCTCGGAGGAGGACGAGCCATGTCACTAGGCTCGGGCGCCATGCAG
GCTGCCCAGAACTTTGGCCCGGGCCCTGGCGGCTTTGGAGCAGGCAGAACCATGTCCGGG
CTGTCGATGCATTCTATGGGCTCCATGCACTCAATGGGAGGCCCCAGACGGTCCAACGGT
AGCTTTGGACCGGGTGGACCAGGCGGGTTCGGACCGCTGTCACCAGGAGGAGGCCCTGGA
GGTCCACCTCCCAACTTTGGACCCTTGTCGCCAGGTGGAGGACCTGGAGGACCTGGACCA
AACGGGTTCTTTGGACCAGGACAGGGATACTACGGTCCAGGACCCGGTCCCGGAGGTCCT
CCGTTCCATCCGCCTCGACATGGCTCTCCAGGACCAGGGTTTCATGGATCGCCTGGTCCT
GGGTACCATGGTTCTCCTGCCATGCATAGTTCCCCCAACCCTGGCCAGTATGGTCCTGGG
ATGCCTGGACAATACGGACCCGGAGGACCCAACCCTGGGCAGTACGGTCCTGGACAGGGA
CCTGGCGGTCCCAACCATGGCCCCAACTCTGGTCCTAACCCCGGACAAGGCCCCAACCCA
GGCCAGTACGGCTCTACTGGCCCCAATTCAGCCTACGACTCCTCTCCAGCTCCTTCCCCC
AATCCTGACACTCCGGACACATCTGAGTCGTCTCCTCCTCACGTGAAACCAGCTGCCCAG
GTCAAACCGTCGCCCGGATCAGCTCCCTATCCGTCTGGATCGCATCCCAACGCCGTCAAG
CGCGGCTCCCCAGCCCTCGGCAACAGCAAGGAGGATATCTCGTTTGAGGAGGCCGAGGAG
GAGGCCGACGAGTCGTTCAAGCACAAATACGAGTCCCAATATGCGAAGAAGTCAGTGGAG
GAGCTTGATTACGCAAATAAGCAGACGGACGAGACCGGCTTTGCGCTGCCCCAGCTGCCC
GACATTGACCAGGCCTCCCTTAATGTCCCTGGTGTCATGTCCAAGACTCCCACGCCCACA
ACGACCGTTTTCCCCAATGGCATTTCTGCTGAGGAGCCTGCCGAGTACTCTGCCTTTGAT
CCCAAGAGTGTAATTCAGGACGCTCTAGCTCGAGGACCTGCTGATGTCAATGAGGTTCAG
AGTAACGAGTTTGAGCGCAAGTTTGAGCGGGAGGCTGAACGGGAGGTGGAGCAGAATACA
GGTTACCGGGATGACGCCTATGGTCAGGATGAGTATGGTCAGGGCAACGGTTACCATGGA
GATGAATACAATGCTCAGGGTGAGTATGGTACCCAGAACCAGGGTGAATATGGTCAGGAC
GAGTATGGAAACAATGGCAACCTTTCTCAGAAAGAGTTCACTGAGGTGGCTCCCTCAACC
TCTCCTACCCACTCAAAGCACTCCAACTCTACACCTACCAAGGCTCATTCCGAGCTCTAC
CAGCCCGAGTTCTCGCCAGAGTCTTCCCGACAAACCCAGACAGCCTCTGCATTCTCGCCC
CAGTCGATCCCCCCGGCTGGTTCTCCTCTCCCCGAGGGTCCTGTGCGATTGCACAATGCC
GATTTGTACGGTGCTGGCCTCGCTGACCGAAGTGAAGAAATTGTAAGCCCGGTGCGGGAC
GCAAGTGATTTGTCACGTGATAGTGGTTCTCTCACGCATGACAATGGTTCCATCTCCAGC
CAGAACCGTGACAACACATCTCTTTCTCGCGACAACGGCTCAATCTCCAGCCAGAATCGA
AACCCTGGTAGCTCGCCCAGCTACCCTTTCCAGCACTACGAGCAGCGGGACCATTCTGCT
ACTGCCGAGTCGCCCAAGTTCTACTCTTCGCGATCTCCTGACATGTCTCGACAGCCCACT
CTTCCCATTGTTGTTCCCGAGCAACAGGAGCCTCAGGTGGTCGTTGAAAAGAAGCAGGCT
GTGGTGGGTTCTGTGGCCAGTGGTAAGGTGGGTGGAGGTAGTTCTGACGCCGGGTCTCGG
CCCGGGTCTCGTGACAAGTCACACGACAAGTCACTTGACGAATCCCGACCCGAATCTCGT
GATTCATACGACGACGACGGGCCTCGACCCCAGACTCGGTACCGGTCCGACTACCCTGCA
TTTTCAGACTCGCCTACACCCTCCCCTGTCTCCCCTCCTCAGTTCTACAACTCCCGAAGT
CCTGTGTCGTCTACTACTGACAAGATGCGTTCTTTGGATCTGAACGAGGACAAGAGTGAT
CCTTTCGTGGAGTCGAAGGCTATGGAGCCCAAGGCTGCGGAGCGGACTGTTCCTGAGTTT
GAGCCAGTGCACAAGAAGGAGCCTGTTCAGAAGCAGGTTCTTTCTCCTGTCATTCCTACT
CCCGTGCCTGTTCCTGAGGTGAAGGATGTGCCAGCCACTCGAGAGATTGAGGAGGAGGCC
AAGGAGGTGGCGGAGACCGCCCCTGTGGTCACTGTGGCTCCTGCTCCGAAGGTTGACGAG
AAGATGCAAGGAGAGGAGGTGCCTCAAGAGAATGTCGAGTCGGTCGGGTCTGCAGAACTG
GACTCTTCAATCGAACCACCTCAGCGGCTCAGTCTCAAGCCTTCTGCTGATTTCTCTGAT
GCCAAGGCCGGCCTCGATTTTAGCGACTCTGCTCCTCGAGACAAGGCTTCGTGGGCTGCC
AAGTCGCGCCAGCTGTCTTCTTCCCCTGACTCGACTCCCCGGTCTAGCACCCACCATGCG
AGCATGACTCCTCCCTCTGTCAGGCGTGACGGGGTGTCTCCTCGAGCGGTTCGAAACTTC
TCTTCTCCTCGAAAGGAAGAGGTTGTGACTATTGCAAAGGACACTACTGAGGTTGAGCAG
CTGCGACAGGAGTTGTCTGTGCTCACCGGCGAGCTGGCGGACTCTCTGCATCGAGAGTAC
GTTCTCGAGGGTCGTCTGCACAATAAGCGGGGCACCGACGCAGCTTCTGTTCCTTCCTCT
ATTCCCGAGGCGTCTTCCAAACTTGTAGAGCTCGAGAAACAGTTGCTTTTGGAGCGACAA
AAGCGACACCAGGTGGAGAACCATTTCCGAGGCACCCCCGACTACTCCGGACTCTACAAG
GAAAACGAGTTTGCCGAAAAGAGCCGGCAGCTCGTTTCGGCTCGTCTGGAGGTGGAGCGG
CTGTCCAAGGAGCTGCAAGAGCTTCATGACAAGAGCGAGAAGCAGGCATCCGAGATCACG
GCGCTCAACTCGCAGCTGCCGGAGCTTCGAGACCTGGAGGCCGTGCACAAGATGGTGGGT
TCGCCTATTGAGCTACAGAAGCAGATTGACGAGCTCAAGGCGGACAAAATCTCGTTGTCT
CGCACCCTAGAGGAGTCGTCAACCCGAGGACCCATGGGCGAGAAGCTGCGAACGGTGGAG
GGCCAGAGAGATGCGTTCCGGGAGGCGTTGCGGTCGTTGCGAGAACGTAAGGACGCTGAG
ACGCGGTCGTACGCCGACCGAATCAAGGTGTTGGAAGCCCGGCTGGAAAAGGAGAAGCTT
CTTAATTCCAGCATGACTCGACACTTGACTGAGTCACCTTCTTCTACCAGTCTGAGCTCC
AACGGGCGTTTGAACAGTCCCACAGCCCTTGCATTTGACTTGAATAATTAAAATTAATGC
ATGTATATATTATGAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E24101g_CDS-001

Protein length: 1457 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E24101g_CDS-001 MSRFWKKKDKAKDDNHLYLGDEDDYGPQIPTNASSTASFSGPQHPASHSSPSLHQPQNGV
GLGVGVQPEYGGPGNFGPNEGHGYGPGHSPYGQFQDPPQHQQQQYGSDPGTPGGPDAHPI
DSMPELAFENLGSKLSGSGRTMSMSSQGAPAGLSMVLNQSDTNPIIPTLRHPSQTAEGLA
GSAYRKQVAAQRQKLQQQDAQAYHDIGSYPHQSSHLQQLPPPKQRSGPQRFHMGPAGPVP
PGSDYYMPHRASGAPINGPPIGKQTLGGGRAMSLGSGAMQAAQNFGPGPGGFGAGRTMSG
LSMHSMGSMHSMGGPRRSNGSFGPGGPGGFGPLSPGGGPGGPPPNFGPLSPGGGPGGPGP
NGFFGPGQGYYGPGPGPGGPPFHPPRHGSPGPGFHGSPGPGYHGSPAMHSSPNPGQYGPG
MPGQYGPGGPNPGQYGPGQGPGGPNHGPNSGPNPGQGPNPGQYGSTGPNSAYDSSPAPSP
NPDTPDTSESSPPHVKPAAQVKPSPGSAPYPSGSHPNAVKRGSPALGNSKEDISFEEAEE
EADESFKHKYESQYAKKSVEELDYANKQTDETGFALPQLPDIDQASLNVPGVMSKTPTPT
TTVFPNGISAEEPAEYSAFDPKSVIQDALARGPADVNEVQSNEFERKFEREAEREVEQNT
GYRDDAYGQDEYGQGNGYHGDEYNAQGEYGTQNQGEYGQDEYGNNGNLSQKEFTEVAPST
SPTHSKHSNSTPTKAHSELYQPEFSPESSRQTQTASAFSPQSIPPAGSPLPEGPVRLHNA
DLYGAGLADRSEEIVSPVRDASDLSRDSGSLTHDNGSISSQNRDNTSLSRDNGSISSQNR
NPGSSPSYPFQHYEQRDHSATAESPKFYSSRSPDMSRQPTLPIVVPEQQEPQVVVEKKQA
VVGSVASGKVGGGSSDAGSRPGSRDKSHDKSLDESRPESRDSYDDDGPRPQTRYRSDYPA
FSDSPTPSPVSPPQFYNSRSPVSSTTDKMRSLDLNEDKSDPFVESKAMEPKAAERTVPEF
EPVHKKEPVQKQVLSPVIPTPVPVPEVKDVPATREIEEEAKEVAETAPVVTVAPAPKVDE
KMQGEEVPQENVESVGSAELDSSIEPPQRLSLKPSADFSDAKAGLDFSDSAPRDKASWAA
KSRQLSSSPDSTPRSSTHHASMTPPSVRRDGVSPRAVRNFSSPRKEEVVTIAKDTTEVEQ
LRQELSVLTGELADSLHREYVLEGRLHNKRGTDAASVPSSIPEASSKLVELEKQLLLERQ
KRHQVENHFRGTPDYSGLYKENEFAEKSRQLVSARLEVERLSKELQELHDKSEKQASEIT
ALNSQLPELRDLEAVHKMVGSPIELQKQIDELKADKISLSRTLEESSTRGPMGEKLRTVE
GQRDAFREALRSLRERKDAETRSYADRIKVLEARLEKEKLLNSSMTRHLTESPSSTSLSS
NGRLNSPTALAFDLNN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG