YALI0E23804g

Overview

Description similar to uniprot|P38915 Saccharomyces cerevisiae YLR055c SPT8 transcriptional adaptor or co-activator
Locus type CDS
Locus tag YALI0E23804g

Location

Species Yarrowia lipolytica Positions 2811498..2813430
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1933 (nuc.)
Previous locus YALI0E23793g Next locus YALI0E23826g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E23804g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E23804gYALI0E23804g_mRNA-001YALI0E23804g_CDS-001

Nucleotide sequence

 

>YALI0E23804g
ATGTCCAAAGACGACTTTCTCGACGACAAGGCGCTGAACCAGCTGGAGGAGGAGGACGAG
GAGGAGGACGACCAGCAGCATGAGAACGAGGACGATTTGTTTGAAGACGCGCTGGAAAAC
AACATGGAGATGGACGACACGGAGGATGTGGTGATGGGCGATGGAGACGAGGAGGCAGAA
GACGAAGAGGTCGAGGAAGAGGAGGACGAGGAGGTGGTGACGAGGTCCAAGTCAAACGGC
CACATGGCGGCGTCGACGTCGAACGGATCGCACATTGTCTTTGATGACAGTGGCTCCAGC
GACATTCCCGAACATGTGCTCAAGTACACCGGCCGCAGAAACATTCCGCTCTGTACCAAC
ACAGACTCGTGCGAGGGCTACGACATTGTGCCATACGTGGCGGCGATCCACAGCTGTCCC
GTGCATGCGATAGATCTGTCGTGGGAGCTAAAGTGGATGTTTACCGGTGGCCAGGACGGC
TTTGTGCGCAAGTACGATTTTTTTGCGTCCGTCAACGGCAAGCTGCCCCTGACGGTAGCC
CAACGGCATCCGTTTGTGGACTGTGTGACCAAGGCTGGCGTTCTGACGTCGTACTGGGAA
AACGAACAGCCCGTTTATGAAACAGACATCAAGCCTAAGGATGGGCTCTACGAGCCCAAG
CTGTCGTGCGTGTACTCGCTGGCGGCGCATTCGCGGTGTCTGTGGCTGCTTTCGGGTTTG
CAGAGTGGAGGAATCACGCTGATGAGCGTACGACACAACGAGGGCCAGATCCAGGCGTAC
CTCGAGAAACATACGTCTACGGTATCGGTGCTGGTTCTCAACCAGTGGGAGAACAGACTC
TTGTCTGGATCGTGGGACAAGACCGTCAACGAGTGGGATTTGGACACGGGCAATGTGGTT
CGGACGTTTGACGGCATTTCTGGCCAGGTCAGCACCGTGCAGTATCAGCCAGTCGGAGGC
GCAATAGTGTCTCGAAATCTGGGTCTAGAGGGGCTGGATAGTGACAGAACGGCCCGGGGC
AAAGAGATTCTCGAGGGAGACGAGGAGGAAGACGACGACAAAAGCATGGGGTCGTTGTTC
GGGTCGGACGAGGAGGAGGAGGGCGAGTCCGAGGTGAAAAAGGAGGAGGTGGACGTGGCA
GCAGATAAGGAGGCCAGCGAAAGTGTCAAGCCAGGTGATGGTGATGGCAGCGAAGAGCCG
ACCCGCAACACTACCTCGGAGTCCATATTTCTCACGTCGGCCATTGATGGAACAGTAGAC
ATTTGGGATAGACGGCAGCAGCAGCGAATCACACGAATTGCGGTGCCTCAAGGCACCCCG
CCGTGGTGTATGAGTGCATGCTGGTCGACCGACGGAGACCGCATCTACGTTGGTCGACGA
AACAGCACGGTGGAGGAGTTTTCGCTGCGAGGCAATGTGCACGAGCCATCTAAGGTGTTC
AAGTTCCCGTCCGTGTCAGGTGCCGTGAGCACCGTGGCTGCCATGCCCAATAACCGACAC
GTGTTGTGCGGCTCTCACGACAATGTTCGGCTGTACGACGTGCAGAGCTCCAAGCAGCAG
GCTGTGCCGTTCTGGATTGTGCCGGGACATCAGGGCGGTATTCTGTCGTCCATCAAGGTC
GATCCTAGTTGTCGATACATGGTCACCTCCAGTGGAGACCGAGGCTGGAGTGGAACCACC
AGTACAGATGTTGCCTTGGTGTACGAGATTGATCCCATTGTCGGCACCAAGAATCTGTGA
GGTGGGTGGAGACTGGGTTGGATAGATGGAGACTGGGTTGGATTGCCCATGACTGATCCT
TCAAAAGCCCTTTGTAACAGTATTAATGTATTATATGAATGGTCTTGCACGACCATACGG
GTACACACCACACGGGCCTAACCCGAGAAGTACACATCTTGGTAATAATCATAATGTATT
GTCGTCATACTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E23804g_CDS-001

Protein length: 580 aa.
Product: Subunit of the SAGA transcriptional regulatory complex, putative

>YALI0E23804g_CDS-001 MSKDDFLDDKALNQLEEEDEEEDDQQHENEDDLFEDALENNMEMDDTEDVVMGDGDEEAE
DEEVEEEEDEEVVTRSKSNGHMAASTSNGSHIVFDDSGSSDIPEHVLKYTGRRNIPLCTN
TDSCEGYDIVPYVAAIHSCPVHAIDLSWELKWMFTGGQDGFVRKYDFFASVNGKLPLTVA
QRHPFVDCVTKAGVLTSYWENEQPVYETDIKPKDGLYEPKLSCVYSLAAHSRCLWLLSGL
QSGGITLMSVRHNEGQIQAYLEKHTSTVSVLVLNQWENRLLSGSWDKTVNEWDLDTGNVV
RTFDGISGQVSTVQYQPVGGAIVSRNLGLEGLDSDRTARGKEILEGDEEEDDDKSMGSLF
GSDEEEEGESEVKKEEVDVAADKEASESVKPGDGDGSEEPTRNTTSESIFLTSAIDGTVD
IWDRRQQQRITRIAVPQGTPPWCMSACWSTDGDRIYVGRRNSTVEEFSLRGNVHEPSKVF
KFPSVSGAVSTVAAMPNNRHVLCGSHDNVRLYDVQSSKQQAVPFWIVPGHQGGILSSIKV
DPSCRYMVTSSGDRGWSGTTSTDVALVYEIDPIVGTKNL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG