YALI0E23738g

Overview

Description some similarities with uniprot|P47147 Saccharomyces cerevisiae YJR110w
Locus type CDS
Locus tag YALI0E23738g

Location

Species Yarrowia lipolytica Positions 2801807..2804193
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2387 (nuc.)
Previous locus YALI0E23716g Next locus YALI0E23749g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E23738g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E23738gYALI0E23738g_mRNA-001YALI0E23738g_CDS-001

Nucleotide sequence

 

>YALI0E23738g
ATGATCTTCCAGCTAGAAGGCTCCAATCCGCACGAGCAGGCCGATCGGGTGGCCGGCGGG
GTCTCGACGGCGTCCGATGACGTGGCAGCTCTGGACCTGAACAAGGCCGGCGAAAACGGA
CACAGACAAGACACAAATGGCGACACAGATGGCGACACAAATGGCGATACAAATGGCGAC
ACAAAAGGCAACACTAGCAACAACAACAGAAACGATAGTAATGGGAATGGCGGACACAAA
GCCGACAGCGGGAGAGGTGGAAACAGCGACAAAAATGATAGCAAGAATGATAGCAAGAAT
GACAGCAAGAATGACAGCAAGACAGTCAGCAACATTCCAGTTACACCCTCGGAAATCTGG
ATCTCGTATCCAATCATCTCGTCTGTGGAAAAAAAGAACGGCGTGATCCGAATCCGCTGC
AGAGACTTCACCTACCTGGCTCTGCACTTCCATAACGAGCCTGAGGCCAAGGACGTGTTC
GACAGCATCCAGAAGCTGTGCTGCCTGCCATCGGTCGAGCGGCTCTATGCATTCTACTAC
AAGCCCGGCAAGTCCGAGCGACGCTTCAACGGCTGGGCGGCCTTCAACCCCCAACAGGAG
TTTGGCCGCCAGGGCGCCTTTGCCAAAAACAAGTGGCGAATGACCTCGCTCAACGAAAAC
TACGCCCTGTGCGCCACCTACCCGCAGCAGCTCTCGGTACCCGCCTCGGTGTCCGACAAT
GTGCTCAACTACGCTGCTCGGTTCAGGTCAAAAAACAGACTTCCAGTCTTGTCCTTCCAC
AACAGCTTCAACGGATGCACCATTGCACGGTGCTCGCAGCCGCTTGTGGGTCTCAAGAAG
AACCGATCGCCTCAGGATGAGAAGGTGGTGGCGGAGATTTTCGGAACCACCGTCAATTCC
GAGTACGAGACGCCGCGAGACAATCTCATCGTGGACGCCCGGCCCGTGGCCAACGCCGTG
GCCCAGCAAGCGCTCGGAGCAGGGTCCGAGAACACAGACAACTACGCCCGCGGCTCATGC
ACAAAGCACTACCTAGGTATTGACAACATTCACGTGATGCGCGATTCGCTTAACAAGGTC
ACCGATGTGCTCAAGGACGGTGACTACAGCGAACTGGACTACGCTTCGAAAAAGGACGCA
CTTCAAAAGTCTGGATGGCTCAAGTACACAACCATTATTCTAGAGGGCGCTGTGCTCATG
GCCAAGGCTCTGCACCTCGAGTTCAAGCATGTGCTGCTGCACTGTTCCGATGGCTGGGAT
CGAACTGCCCAGCTGTCGTGCCTGGCCCAGATAATGGTCGATCCCTACTTCCGTACGCTC
AACGGCTTCATGGTGCTGGTAGAGAAGGAGTGGTTGGCGTTTGGACACCAGTTCAACGAG
CGGTCGGGCCATTTGAACGGTCCACGGTCGTTTGTGGATCTTACAACAACCCAAAAGCCC
GCGTCGCAGTCAAACGCCTTCTCAGACTTTATGTCTGCGGCTCGGGCGGCGACCCAGGCA
GCCACGCATGCCGCCACGTCTTCCAACCACCTCAAGAATACCTCTCCGGTGTTCCACCAA
TTTTTGGACTGTGTCTACCAGCTGGTGAGACAGTTCCCCGACCGGTTTGAATACTCTGAG
CGGTTCCTGCGTCGGTTGTACTACCATTTGCACTCTGGTCAGTACGGTACATTTCTGTAC
GACAACGAGAAGGAGCGAGTGCAGAATCGAGTGTTTGAACGCACCACGTCAGTTTGGAAC
TACTTTTTGGCCCGCCGATCGCAGTTCATCAACCCGAATTACGATGGAGAGGCTGAGATG
AAACTGTCTGCTACATTGGACGCATTGATTCTGCCAGACGTGGAAAACGTGACCTGGTGG
TTCCAGCTGTTCGGAATTGAGGAGACAGATGTGGTTATTGAGGCTAGCGAGACGGCCGCC
ACCCCCGTGCTAACTGCCAAAGCTGCCACGGAAGGTGTGCCTGCGATGGAAACGCACGCG
ACAGAGGGTGAGGCTGTGGTTACGAAAGCGAAGGCTGAAGTGCCAGCTCCCGCAGTAGAT
GCTGTGGGGAGAACCGTGGGGGGTAAATCTGCGGCTGAGGGTTCAGTGAGTCACGTGGAG
AGTCATGCAGCTGGCGAGGGAAGCTCCGAGGGAAGTGGTGCGGCTGGTTCGGATGCGAGT
CCCACCACAACCACGGGGTCTTCTCCGTCCGAGGAGGAGCCTGTGGAGCAGGGAAATCCG
CTGGGAGACGTGACGCCGCGTACCAAGATTCTGGAGAAGAAGCGGGTCCATATCCAACCG
CTGTCTAACACGTCGGTGGAGTACGCCTCGTTTGAGTAGTCTATGGTTTTTACGGTAGAC
ATTGATTGCCATGATGTAATGATGTAACGATAACGATTATGATGTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E23738g_CDS-001

Protein length: 773 aa.
Product: Conserved hypothetical protein

>YALI0E23738g_CDS-001 MIFQLEGSNPHEQADRVAGGVSTASDDVAALDLNKAGENGHRQDTNGDTDGDTNGDTNGD
TKGNTSNNNRNDSNGNGGHKADSGRGGNSDKNDSKNDSKNDSKNDSKTVSNIPVTPSEIW
ISYPIISSVEKKNGVIRIRCRDFTYLALHFHNEPEAKDVFDSIQKLCCLPSVERLYAFYY
KPGKSERRFNGWAAFNPQQEFGRQGAFAKNKWRMTSLNENYALCATYPQQLSVPASVSDN
VLNYAARFRSKNRLPVLSFHNSFNGCTIARCSQPLVGLKKNRSPQDEKVVAEIFGTTVNS
EYETPRDNLIVDARPVANAVAQQALGAGSENTDNYARGSCTKHYLGIDNIHVMRDSLNKV
TDVLKDGDYSELDYASKKDALQKSGWLKYTTIILEGAVLMAKALHLEFKHVLLHCSDGWD
RTAQLSCLAQIMVDPYFRTLNGFMVLVEKEWLAFGHQFNERSGHLNGPRSFVDLTTTQKP
ASQSNAFSDFMSAARAATQAATHAATSSNHLKNTSPVFHQFLDCVYQLVRQFPDRFEYSE
RFLRRLYYHLHSGQYGTFLYDNEKERVQNRVFERTTSVWNYFLARRSQFINPNYDGEAEM
KLSATLDALILPDVENVTWWFQLFGIEETDVVIEASETAATPVLTAKAATEGVPAMETHA
TEGEAVVTKAKAEVPAPAVDAVGRTVGGKSAAEGSVSHVESHAAGEGSSEGSGAAGSDAS
PTTTTGSSPSEEEPVEQGNPLGDVTPRTKILEKKRVHIQPLSNTSVEYASFE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG