YALI0E23177g

Overview

Description weakly similar to uniprot|P42836 Saccharomyces cerevisiae YNL326c similarity to YOL003c, YLR246w and C.elegans hypothetical protein
Locus type CDS
Locus tag YALI0E23177g

Location

Species Yarrowia lipolytica Positions 2720598..2721915
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1318 (nuc.)
Previous locus YALI0E23155g Next locus YALI0E23185g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E23177g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E23177gYALI0E23177g_mRNA-001YALI0E23177g_CDS-001

Nucleotide sequence

 

>YALI0E23177g
ATGCAGTGCCGCAAATGCTGCTTTGCATGCGAAAAATGGTGCTTCATAGGCGCCAAGGCG
TTCCTGCCGCTCGTCGTCAATTTCCTCATCATCTGGGCCTGCTGGGTCCACGCATGGCTG
GTGTGCTGGGAACCGCAGTTGTTTGAGTCCGACACCACCTTCTGGCGCGTCTACGGCGTG
GCGGGCGTGGCTATCGGCATCATGTGCAACGTGCTCTATCTCAAAGTATGCAAGGTGGGC
CCCGGAAGCCCCACCGACATCGACAACTTCTCGGTGCCACTGGTTGAGTACCAGAACGCA
TGCAGCGCCGAAGGCCAACATCTCACGCCTCCTCGAGAGATGGCTAACTCCGTGTGTGCC
AAGGAGAATGGAGGTCTACGGTTCTGCACCAAATGCATCGGCTGGAAACCGGACCGATCA
CACCACTGCTCAAACTACAAGCGATGCGTGCTCAAGTTTGACCACTACTGCCCCTGGTTT
GCCACGGCCATCGGGTTCCACAACCACAAGTACTTTGTGCTGTTTCTGTGGTACGTGACC
ATTCTGTGTTTCTTCTGTCTCGGCTCTACGGGCTTTGTCTTCTACAACCACATTCTGGAG
ATTGGTGCCATGCGCGGCCCGGACGGAAACACAGACTACGTGGGCGCAATATCCGTCAAC
GTCATGATCCTCATGGTCCTGGCACTGGTGTTTGCCATCGCGGTCGGCACGTTTGCCACC
TTCTCGCTCTACCTCGTGTTCAACAACCAGAGCACGGTCGAGTTTCTGGAAAGCACCCAG
TACCGGTCTGCCGTGCCCACTGCCGCATACAGATACACGTTTGCGCCTACGTCCAAGACG
GTCGGAAACGTGTTTGACGTGGGCTGGAAACGCAACTTCCAGCTCGTCATGGGCGACAAG
TGGTGGATGTGGCTGCTGCCTATCCAGCCCAGTGAAGCGGCCCGGGGCAACGGTACCCAG
TTCCCCCTTAATAAACAGGTGCTGCAAAAGATCAGAGAGGCCGCGGCTAAGGAAGTCCAA
ATCAGAGACCAGAACCAGGCCTACATCAAGCAGCAGCGTCAGCAACAGCAAAAACGCACA
CAGTACGACCTTCCTCAACATCTCCAGCCTCCTCCTCAGGAGCACTATGAGTATGACGAC
GAGGCCCAAGACTCTGGAGACGACATTCCATTGATCAACATGGTCAATAAGAACAACACG
AAATGAGAATAAGAGGTAGCCGACGAATGAATCGGGGGCCGACAAATTCTTGGAAGCTAT
CTCTCCCCTCCAGCATATAGACATTGCATTTAACCTGATATATTATACCCCATTCAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E23177g_CDS-001

Protein length: 402 aa.
Product: Conserved hypothetical protein

>YALI0E23177g_CDS-001 MQCRKCCFACEKWCFIGAKAFLPLVVNFLIIWACWVHAWLVCWEPQLFESDTTFWRVYGV
AGVAIGIMCNVLYLKVCKVGPGSPTDIDNFSVPLVEYQNACSAEGQHLTPPREMANSVCA
KENGGLRFCTKCIGWKPDRSHHCSNYKRCVLKFDHYCPWFATAIGFHNHKYFVLFLWYVT
ILCFFCLGSTGFVFYNHILEIGAMRGPDGNTDYVGAISVNVMILMVLALVFAIAVGTFAT
FSLYLVFNNQSTVEFLESTQYRSAVPTAAYRYTFAPTSKTVGNVFDVGWKRNFQLVMGDK
WWMWLLPIQPSEAARGNGTQFPLNKQVLQKIREAAAKEVQIRDQNQAYIKQQRQQQQKRT
QYDLPQHLQPPPQEHYEYDDEAQDSGDDIPLINMVNKNNTK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG