YALI0E22979g

Overview

Description similar to uniprot|O13432 Candida albicans FRS1 Phenylalanyl-tRNA synthetase beta chain
Locus type CDS
Locus tag YALI0E22979g

Location

Species Yarrowia lipolytica Positions 2707170..2709026
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1857 (nuc.)
Previous locus YALI0E22957g Next locus YALI0E23001g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E22979g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E22979gYALI0E22979g_mRNA-001YALI0E22979g_CDS-001

Nucleotide sequence

 

>YALI0E22979g
ATGCCTACCATCTCCGTGGACAAAGAGGACCTGTACAAGGCCATTGGAAAGACCTACACG
ACCGAAGAGTTCGACGAGCTCTGTTTCGAGTTTGGAATCGAGCTGGACGAGGACACCACC
AACGACTGCGTTGGAGATGAGCGTCCCCAGCTCAAGATTGAGATCCCCGCCAACCGATAC
GACATGCTGTGCATCGAGGGTATTGCGCAGGCTCTCAATGTGTTCCTTGGCCGGGCCGAG
GTGCCCGAGATCAAGCTTACTAAGCCCTCCAAGATGCTTGAGCTCACCATTCACCCCGAG
ACCGCGGAGGTTCGACCCTACGCTGCTGCCGCCATTCTGCGAAACGTGACCCTCGACCAG
CGAAAGTACGAGTCCTTCATTTCTCTGCAGGAGAAGCTGCACTCCAACATTTGTCGAGGA
CGACAGCTGGTGGCCATTGGTACCCACGACTTTGACAAGATGGTCCAGGATGGCCCCTAC
GCTTACAAGGCCTTCAAGCCCAACGACCCCAAGATGTCCTTCGTGCCTCTCAACCAGACC
AAGGAGCTCACCGGAGAGGGAGTCATGGAGTTCTATGAGAAGGACAAGAACCTCGGAAAG
TTCCTCTACATTATCAAGGACGCCCCCGTCTACCCTTACATTGTCATGGGCGACGACAAC
ACTGTCTGCTCTCTGCCCCCCATCATCAACTCCGACAAGACCAAGGTTTCTCCCGACACC
AAGAACATTTTCATTGAGGTGACTGGAACCGATAAGACCCGTCTGGAGATTGTTCTGTCT
CAGATTGTCGCTGCTTTCTCCGAGTACTGCGCCGAGCCCTTCACCGTCGAACCTCTCAAG
GTTGTCTCCGAGCACAATGGTGAGACTCGAATCACCCCTGAGATGACACCTCGAGTCATG
CAGGCCGAGATTCCCTACATCAAGTCGTGCTTGGGTCTGGATCTGTCTGCCGACGACATT
ATCAAGCTGCTGGCAAAGATGTCGCTTCAGGCTTCCAAGACTTCCAACCCCGATGTGCTT
GACGTGGCTATCCCCCCCACCCGATCCGACATTCTGCATCAGTGCGATATCATGGAGGAC
GCTGCCATTGGTTACGGCTTCAACAGTCTGCCTAAGACCCTCCCCATGAAGTCTGCCACC
GTCGGTAAGCCCCAGCTCATCAACAAGGTGTCCGACATTGTTCGACGAGAGGTGGCCATG
AGCGGCTGGGCCGAGGTGATGCCTCTGACCCTGTGCTCGCACGACGAGAACTTTGCCTTC
CTCAACCGAAAGGACGAGGGCCAGGCCGTGCACCTTGCCAACCCCAAAACACAGGAGTAC
CAGGTGATCCGAACCTCGCTTCTCCCCGGTATTCTCAAGACTATCAGAGAGAACAAGAAG
CACTCGCTGCCCATTAAGGTGTTTGAGACCGGTGATGTTGTTTTCAAGGACGAGTCCCTC
GAGCGAAAGTCGTACAACCAGCGAAACTTCGGAGCCGTCTACTCCGGAAAGACCTCCGGT
TTCGAGACTGTGCACGGCCTTCTTGGCCGACTGATGCAGATGCTGCGAGTTTCGTGGATC
GAGAACCCCAAGGAGTCCACTTCCCGAGGCTACTGGATCGAGGAGTCGCACTCTGAGACC
TTCTTCCCCGGCCGAGGCGCCACCATCCACCTGCGAACCAAGGACGGAGCCGAGGCCAAG
GTAATTGGAGAGATGGGCATTCTGCATCCCAATGTCCTGGCCAAGTTTGAGATTCCTTAT
GCTTCCTCCAGCATCGAGTTCAACATTGAACCTTTCATGTAGGGGGAGTATAGAGAGTAA
TAGATTATGATTGATGTACAGATTCACAAACAGACGAACCAAGCGAGGAAGGGGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E22979g_CDS-001

Protein length: 594 aa.
Product: Phenylalanyl-tRNA synthetase beta chain, putative

>YALI0E22979g_CDS-001 MPTISVDKEDLYKAIGKTYTTEEFDELCFEFGIELDEDTTNDCVGDERPQLKIEIPANRY
DMLCIEGIAQALNVFLGRAEVPEIKLTKPSKMLELTIHPETAEVRPYAAAAILRNVTLDQ
RKYESFISLQEKLHSNICRGRQLVAIGTHDFDKMVQDGPYAYKAFKPNDPKMSFVPLNQT
KELTGEGVMEFYEKDKNLGKFLYIIKDAPVYPYIVMGDDNTVCSLPPIINSDKTKVSPDT
KNIFIEVTGTDKTRLEIVLSQIVAAFSEYCAEPFTVEPLKVVSEHNGETRITPEMTPRVM
QAEIPYIKSCLGLDLSADDIIKLLAKMSLQASKTSNPDVLDVAIPPTRSDILHQCDIMED
AAIGYGFNSLPKTLPMKSATVGKPQLINKVSDIVRREVAMSGWAEVMPLTLCSHDENFAF
LNRKDEGQAVHLANPKTQEYQVIRTSLLPGILKTIRENKKHSLPIKVFETGDVVFKDESL
ERKSYNQRNFGAVYSGKTSGFETVHGLLGRLMQMLRVSWIENPKESTSRGYWIEESHSET
FFPGRGATIHLRTKDGAEAKVIGEMGILHPNVLAKFEIPYASSSIEFNIEPFM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG