YALI0E22781g

Overview

Description weakly similar to uniprot|P38713 Saccharomyces cerevisiae YHR073w OSH3 similarity to OSH1P, YDL019C (ohnolog of YAR042W) and mammalian oxysterol-binding protein
Locus type CDS
Locus tag YALI0E22781g

Location

Species Yarrowia lipolytica Positions 2687645..2690092
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2448 (nuc.)
Previous locus YALI0E22770g Next locus YALI0E22803g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E22781g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E22781gYALI0E22781g_mRNA-001YALI0E22781g_CDS-001

Nucleotide sequence

 

>YALI0E22781g
ATGGAAACCATCGAAGTGGCCTCGCGGTCGTTTGTCATCAAGTGGGTCACTGCCCCCGAG
GGCTCCGCCATCACCTTCAAAGTTCACCCCCTGAAAAAGTCCATCAACGTGGGCATCTTC
GAGAAGGAGCGGAGCAACAACTTGCAGGTCGAAATCGAGGCTGAAGGACACAATGCCGGC
CGACGAGCCTCCATCTCGGCTCCCCACTCGGGAACCATCGAAAAACGACTTGAATCAAGC
GGATTGTCCCCTGTTCTGCCGCTCAAAAAGTGCAACGCCAACGAACAGTCCGAGGGAGTC
TACAAGGTCCCCAAGGGAAAGGGAGGCATCTACGCCCTTGTGTTCGACAACACCTTCTCC
AAAACCACACCCAAAACCGTCCATTTCACTGTCCAGGCCATGGAAGAGGGACATGCGGCT
AACAATGCTCCCCATACCCTTGTCTCCGAGACCGCCGTATCCGGTATCCTGCTCAAAAAG
CGACGAAAGAAGCTCCAGGGATACACCCGACGGTACTTTGTTCTGGATCTCAAGCTGGCC
ATTCTCAATTACTACACAGACCCCAAGTCCAACTCGTTGCGAGGCTCTCTGCCCCTGACC
TTGTGTGCCATCTCTGCCTCCAAGGCCCAGAGACTCATCTTTGTGGACTCGGGTATGGAG
GTGTGGAACCTCAAGGCCCTCAACGACGCCGACTGGCAGATCTGGGTCGACACCTTTGAG
CGGATCAGAAAGGGCAAGAGCGGAGGAGCTGCTGACGAACCTGTTCCCGCAGTCGCTGCT
GTGACCGCACCTGACCAGGAGAAGTTTGCTCAGCTTGTGGCCAAGCTACGAGAGACCAAG
GATATTTCCGATGTGGCTGCTCAGGAGCCCGGCGCTTCCAACGTGACCAAGGACCTCAAT
GCGCGCCTAGCAGCGCTGTATCTCGAGTTCACCGACGTGGTGTCCCATGTTGCTCATGAG
AGCGCCATGTACTCACAGCCCATGGCCAAGCGAGCGTCCTTTAACGGCTCCATCATGTCC
GAGCATGACACTTTCTACGACGCTGAGGAGAACCCCGACAAGGACGGAGTTGTGTTCCTG
GACGACGACGCTGTTGACGACGATGACGACGGAGCTGAGCACGACTCCACAGACGAGGAG
GACGAGGGACACCATGTTGCTCCTGTTGTCCATGATGCTGATGACGCTGATGATCTGTAC
CCACTGCATGAGGTTCAGCCGGTCAAGCACCGAGTCACTCTTCCTGATGCTGCTTCCACC
CCCCCTTCCATGTTGGGTATCCTCAAGAAGAGTGTCGGCAAGGATATGGGCTCCATGGCC
GTCCCCATCACCACCAACGAGCCTATTTCTGCTCTACAGAGATTCGCCGAGATGTTCGAG
TACCCCCAGCTGCTGGACGAGGCTGAAAACGTGCCTGCCAATGACGGAGAGCGAATCATC
TACGTGGCCACCTGGGCTGTCTCCTACCTCGCCTCCATGCGAGCTAAGGAGCGAGCTCTC
CGAAAGCCTTTCAACCCTCTTCTTGGAGAGACCTATGAGCTGGTTCGACCCGATCTCGGT
TACAGACTCATCTCTGAAAAAGTGTGTCATCACCCTCCCGTTATGGCTCTGCATGTAGAC
TCCGAGCATGGCTGGTCTGTGGCCCACTCGTCTGAGCCCGTGCAGAAGTTCTGGGGTAAG
TCGATGGAAATTAACTACCTGGGCCCTATCGTCGTTAAGTTCCGACAGTCCGGCGAGGTT
TTCCACTGGAGCAACCCCACCACGTACCTGCGAAACATCATGGCTGGTGAGAAGTACACC
GAGCCTGTTGGCGACTTCACCATCTTCTCTTCCACCGGAGAGAAGGCCATTGTCGAGTTC
AAGGCCGGAGGAATGTTCTCCGGTCGAAGCGAAGAGCTCAACATCAAGGCTGTTTCAGCT
AATGGTTCTAACCTGCCCTGCTTCGCCTCCGGTAAGTGGACCGAGCAGATCACCCTCAAC
AACGCCAAGGGTCAGAAGAAGACCATCTGGAAGGTCGGCAACCTCGTCAACAACCACACC
AAGAAGTGGGGTTTCACCGAGTTCACCGCCGGTCTCAACGAGGTCACCCCCATCGAAAAA
GGACACGCTTCCCCTTACGACTCGCGGTTCCGACCCGACCAGAAGGAGTACGAGGCTGGC
CAGACCGACAAGGCCGAGGCCGGCAAACAGGAGCTGGAGGAGAAGCAGCGGGAGCGACGA
AAGGTGCTACAGGACTCGGGTAAGACGTACAAGCCCACCTTTTTCGAAAAGTCGTCTGGT
TTGGACGGAGTCAACGAGCAGGGCGATCTGTACCTGCTTACCAAGGGTCCCAACAACTAC
TGGAACCGACGAAAGCAGGGCAACTGGGAGGGTCTTACTCCTTTGTGGTAGGCTGGTAGT
TTAGACATGTAGACTATTTACCAATGAGATATGATTTTGATAAGCAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E22781g_CDS-001

Protein length: 797 aa.
Product: Conserved hypothetical protein

>YALI0E22781g_CDS-001 METIEVASRSFVIKWVTAPEGSAITFKVHPLKKSINVGIFEKERSNNLQVEIEAEGHNAG
RRASISAPHSGTIEKRLESSGLSPVLPLKKCNANEQSEGVYKVPKGKGGIYALVFDNTFS
KTTPKTVHFTVQAMEEGHAANNAPHTLVSETAVSGILLKKRRKKLQGYTRRYFVLDLKLA
ILNYYTDPKSNSLRGSLPLTLCAISASKAQRLIFVDSGMEVWNLKALNDADWQIWVDTFE
RIRKGKSGGAADEPVPAVAAVTAPDQEKFAQLVAKLRETKDISDVAAQEPGASNVTKDLN
ARLAALYLEFTDVVSHVAHESAMYSQPMAKRASFNGSIMSEHDTFYDAEENPDKDGVVFL
DDDAVDDDDDGAEHDSTDEEDEGHHVAPVVHDADDADDLYPLHEVQPVKHRVTLPDAAST
PPSMLGILKKSVGKDMGSMAVPITTNEPISALQRFAEMFEYPQLLDEAENVPANDGERII
YVATWAVSYLASMRAKERALRKPFNPLLGETYELVRPDLGYRLISEKVCHHPPVMALHVD
SEHGWSVAHSSEPVQKFWGKSMEINYLGPIVVKFRQSGEVFHWSNPTTYLRNIMAGEKYT
EPVGDFTIFSSTGEKAIVEFKAGGMFSGRSEELNIKAVSANGSNLPCFASGKWTEQITLN
NAKGQKKTIWKVGNLVNNHTKKWGFTEFTAGLNEVTPIEKGHASPYDSRFRPDQKEYEAG
QTDKAEAGKQELEEKQRERRKVLQDSGKTYKPTFFEKSSGLDGVNEQGDLYLLTKGPNNY
WNRRKQGNWEGLTPLW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG