YALI0E22737g

Overview

Description weakly similar to uniprot|Q03818 Saccharomyces cerevisiae YMR159c APG16 protein required for autophagy; weakly similar to uniprot|Q03818 Saccharomyces cerevisiae YMR159c APG16 protein required for autophagy; weakly similar to uniprot|Q03818 Saccharomyces cerevisiae YMR159c APG16 protein required for autophagy
Locus type CDS
Locus tag YALI0E22737g

Location

Species Yarrowia lipolytica Positions 2683019..2684091
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1073 (nuc.)
Previous locus YALI0E22715g Next locus YALI0E22759g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E22737g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E22737gYALI0E22737g_mRNA-001YALI0E22737g_CDS-001YALI0E22737g_CDS-002YALI0E22737g_mRNA-002YALI0E22737g_CDS-002

Nucleotide sequence

 

>YALI0E22737g
ATGAACAGCTGGGAAGAAGCACTTTCAGTAGCTCTCGATAAAAGAGACGAGGGCGACCAC
TCAATGGCCGAGGTCTATCGGGCCTGTGAGTATCACACGTGGCCACATCGACCCTGGTAC
TTCTGCTAACACAGTCCACACAGCCGCTACCAGAGCAGTAGCCACCCCGTCCAGTTCGTC
AGAGTGAGTATATCACTTTGATGAGACAGCTTCTCTGAAGTAACTAACACAGAAATAATG
AGGAAGGCACGCATGACGTGAATCCGCGACTCAACAATCTCATGCAACTGAACGTGACCC
ATCGAACCAACGCCGAACGACTGGAGAAACATAACCGGGAGCTGGAAACGGCCCTTGCAA
AGAAGACAGAAGAACACAAGGAGCAGGCAAAAGCGTTGTTACTGTTGCAGGACGACATGC
TGGCAAACCAGATCCAACTGAATGTCCTGGAACAGAAAACCGAGGCTCTGCAACAGGAGA
ACGAAACTCTTGTTCAGAGACTGGTAGCCAAGGCTGCTGCTGATGCCGACAAGATGAACG
ATGCCAATGCGTTTCTCGAGAGGTGAGTATAGGAGGGCTTTTATGACGGTGTTGGGAGCT
ATTGGCGGTGGCGCGTGACGCTAGCAAACCGACAACGACGTTCCGGCCGCGTATATGATG
TGATGATGACTACGTGACAGCTGCTACGGTGCATTCGATTGTTCGTCTACACGTACTCGT
CTACCAACAATACTAATATACACTTATTTACTAACCCAGCCTTAATATCCACCCTTCGAC
AAAAACGCCTTGATGGCACTTCTGTCCACGGTCGAAATGTAATATGTTCCTCCTGCAGCC
GTCCAGGAGACGGAGCCCGAGTAAAAGTCCAACTTTTGTACCTTCAAAATGTTGACAGGC
GACTCAATGTTATGTTCGGAAATGACATGGCCTACTGGCACAAACGACTTGAGCGAAACA
ATCTTGCATCCCTCCTTGAGATCCAAAAACATGTCTAGCAAATGCGCGTTGAGAGTGCCG
TCAAATGCATAGTTATTTACCAGCAATACATCTGCGCGAGAGATGGCCGAATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E22737g_CDS-001

Protein length: 166 aa.
Product: Conserved hypothetical protein

>YALI0E22737g_CDS-001 MNSWEEALSVALDKRDEGDHSMAEVYRAFHTAATRAVATPSSSSENNEEGTHDVNPRLNN
LMQLNVTHRTNAERLEKHNRELETALAKKTEEHKEQAKALLLLQDDMLANQIQLNVLEQK
TEALQQENETLVQRLVAKAAADADKMNDANAFLESLNIHPSTKTP*

YALI0E22737g_CDS-002

Protein length: 156 aa.
Product: Conserved hypothetical protein

>YALI0E22737g_CDS-002 MNSWEEALSVALDKRDEGDHSMAEVYRAFHTAATRAVATPSSSSENNEEGTHDVNPRLNN
LMQLNVTHRTNAERLEKHNRELETALAKKTEEHKEQAKALLLLQDDMLANQIQLNVLEQK
TEALQQENETLVQRLVAKAAADADKMNDANAFLER*

YALI0E22737g_CDS-002

Protein length: 156 aa.
Product: Conserved hypothetical protein

>YALI0E22737g_CDS-002 MNSWEEALSVALDKRDEGDHSMAEVYRAFHTAATRAVATPSSSSENNEEGTHDVNPRLNN
LMQLNVTHRTNAERLEKHNRELETALAKKTEEHKEQAKALLLLQDDMLANQIQLNVLEQK
TEALQQENETLVQRLVAKAAADADKMNDANAFLER*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG