YALI0E22671g

Overview

Description some similarities with uniprot|P40028 Saccharomyces cerevisiae YEN1 YER041W Protein of unknown function, has similarity to endonuclease Rth1p; potentially phosphorylated by Cdc28p
Locus type CDS
Locus tag YALI0E22671g

Location

Species Yarrowia lipolytica Positions 2678219..2680726
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2508 (nuc.)
Previous locus YALI0E22649g Next locus YALI0E22693r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E22671g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E22671gYALI0E22671g_mRNA-001YALI0E22671g_CDS-001

Nucleotide sequence

 

>YALI0E22671g
ATGGGGGTTGGCGAGTGAGTACAAAATGCGCAATCAAACCAATTACCAATGACTTTTACT
GACTCAGCTTCTGGCAAGAAATCGAAGACTGTCGGGGAGCATACGAGACCCCCGAGTCTG
GAGGAATCTCCCTAGAAGGATTTGGCAAGAAGTTTTACGAGAAACATGGTCGAGAACCGA
TTCTGGCCGTCGATCTGTACCTCACTTTTTTCCAGAACAGGGAAGCCATTGGGGGTAACA
AAACCGCCCCCGTCGTCATGAACATGGCCGAATCTCAAAAGATCCAAAAGGCGTCCTTCT
TCAACATCTGTTCCAACTTTCTGGAGGCCGGCATCAAGATCGTGCTTGTTTGTGATGGAA
AAGACAAGCCTGCTGTCAAGCGACTCAAGAAACGGCCGAACTACACCAAGGAACAGGCTG
AAATTACGGCTTTCAGAGAGATCGCTGCGTCACTAAGAATTCCAGTGGTGGATGCAGCTG
GAGAAGGAGAGGCCCAGTGTGCTCATATGCAGAGGCATGGACCGGCTGACTTTGCATACA
CGGAGGACTCGGATGTGATTATTTTTGGAGCTCGAAAGATTGTCCGGAAGCTGAAGAAGA
CGAAAGAGAAGGCCAAGGGTAAGAATCCTTCTGAAGACAAGGACAGCGACAAGGAAAAGG
ACAAGAACGCTACCAAGTCTAAACAGAATGTGGATGGACGGTTTGCTATCTACGAGATGC
CTGACGACCACAAGTGGGCTTCTCCATCCAAGCTGCTGTGTTACGCTATTTTACGAGGAG
GAGATTACAGCACTGGAGGCAAATTCATTGCGGACGCATATGCTGGAGCTATTGCTCAGG
GAGGAGATTGGGCCGAGAGGTTATACGAGATATCCAAACTTGATCCAAATAGCAACGTTG
TTTTCGAGAGGCCAAAGAAGGAGAAACAGCTGCGCCTATGGGCCAAAGATCTGCAAGCAG
AAATCGTCCAACCTCCTGTGCCAATAATGTCCAAGGATGGATCGAAGCTGCTCAAGAAGA
CTATCGTTCCCAGGAGTGACCTGTTCAAAAACATGGATAGGAACATTGGTAACAACGCTG
TGGTTGTTGCTCCTGAGCTGGCAAACATTGAATCTTATGCTACTCCTAAGATTGTGAAGA
GATATAACTTCACCACAGTTCCCGAGTTCACTCTTGATCACAAATTTTTCAGAGACTATG
GTAAGGAGCTGGGTTGGATCACTAAAGAAGGTGACGATACTCTGTGGTTCAAACGAATGG
CTCGTCCTCAAATGGTTCGTTATCTGAAGGATAACAACCACAGCAAGTATTTCAGGTTTG
TCAACCAGCGTGACAAGTCATGCGATAAAGACGTCTATCTCATTGAGTACTGCCCCTACT
ACATTGTACAGTACCCCAATCACAAGTGCAGTCATTGTGGAGAAGATGCATGTCGTCGTA
TAAAGAGCTCTGTATCTGCCAGCATTCTGATGCAGAGCCAGTACGATTACAAGCAGGTCT
ATGTCGACCATTTGACCAAGCCAAGAGCAAAAAAGCCTCGAGCTAATAAGAAACACGCCA
AGTCGTCTTCCTCGTCCTCCTGCGCCTCTATCACTTCATTCTTCACCGTCACTAAACCAC
TTGAGACTGCTTCTCCTCACAAGCATAATGAGACGACCATGCCACAGGCGATTTCTGATT
CGGACGACATCATCATTGCCGACGAACCGTTTGCGCCAGTGATTGTATCTAGTCCCGAGG
AGATTATGATCACAGATGAGAAGCCGGCTTCATATGATGGAAAGTTCGGTTATGGAGACG
ACTTCGACTGGGACTTAGCCATGGGAAAGACTTCTACCAGCAGTAAACCAGCCACAAAAC
AATCTGCGCTTCCTGGCTTGACCCGATCTGCTGCTGCTCTTTCACGGAAGCCAGCAAACA
AAGTCGCCAAGAAGAAATCAGCTGGTGCAAGTCCCACGAAGGCCTCAAAGGCTAGAAAAC
AATCAACGCTCAGCTTCCTGTCTTCGAAAACATCGACGGTGGAAGGAGTTGGAAATGCCC
CAGACAACCTGGGGGCTACCATAGTTCTCTCGGACACTGAAGAGTCGACCGAAGAAGATG
TGCCAACAACAGTAAATCTCGATAGTTCACCTGTGAAGATTCAGAGAGCCACTCGAATTG
GCACACGGGACTCTGACAATCAGTTCTCCCAGAACCTCCAAACCTTTACATCTTCCAATG
ATGGTTACTCTCAGCCTCTGCAGTCCTTTGCTTTTCCACCAGAACCGGAGTTGATTGAGT
TGTCGGATTGATCGGTGGCTGCCTTTAGTCTTAACACATGCTGACGTTTACATGGCTCTT
TTCAATCTCACTATGCATTGACTGTTGTCAGCCTGACTACTATTTCATCAGCTACAAGTA
CAAGTACACCGTCTGTCTGATGAAACTGTCGGAATGACTGATACGATCTCCACTTGTAAC
CATATACACATACTAACTAACTGATATCAATACATGACACTAACCTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E22671g_CDS-001

Protein length: 746 aa.
Product: Conserved hypothetical protein

>YALI0E22671g_CDS-001 MGVGDFWQEIEDCRGAYETPESGGISLEGFGKKFYEKHGREPILAVDLYLTFFQNREAIG
GNKTAPVVMNMAESQKIQKASFFNICSNFLEAGIKIVLVCDGKDKPAVKRLKKRPNYTKE
QAEITAFREIAASLRIPVVDAAGEGEAQCAHMQRHGPADFAYTEDSDVIIFGARKIVRKL
KKTKEKAKGKNPSEDKDSDKEKDKNATKSKQNVDGRFAIYEMPDDHKWASPSKLLCYAIL
RGGDYSTGGKFIADAYAGAIAQGGDWAERLYEISKLDPNSNVVFERPKKEKQLRLWAKDL
QAEIVQPPVPIMSKDGSKLLKKTIVPRSDLFKNMDRNIGNNAVVVAPELANIESYATPKI
VKRYNFTTVPEFTLDHKFFRDYGKELGWITKEGDDTLWFKRMARPQMVRYLKDNNHSKYF
RFVNQRDKSCDKDVYLIEYCPYYIVQYPNHKCSHCGEDACRRIKSSVSASILMQSQYDYK
QVYVDHLTKPRAKKPRANKKHAKSSSSSSCASITSFFTVTKPLETASPHKHNETTMPQAI
SDSDDIIIADEPFAPVIVSSPEEIMITDEKPASYDGKFGYGDDFDWDLAMGKTSTSSKPA
TKQSALPGLTRSAAALSRKPANKVAKKKSAGASPTKASKARKQSTLSFLSSKTSTVEGVG
NAPDNLGATIVLSDTEESTEEDVPTTVNLDSSPVKIQRATRIGTRDSDNQFSQNLQTFTS
SNDGYSQPLQSFAFPPEPELIELSD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG