YALI0E22506g

Overview

Description similar to uniprot|Q0D1B5 Aspergillus terreus hypothetical protein ATEG_00269
Locus type CDS
Locus tag YALI0E22506g

Location

Species Yarrowia lipolytica Positions 2648776..2650297
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1522 (nuc.)
Previous locus YALI0E22484g Next locus YALI0E22528r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E22506g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E22506gYALI0E22506g_mRNA-001YALI0E22506g_CDS-001

Nucleotide sequence

 

>YALI0E22506g
ATGAATTCCCACGACACTGAATTTCTGGAGAAGGACCCCAACATTGGCTCCTACAGCCCT
CCTACCGACGGGTCTTCTCTGGAGGCCTCAGATCGGCCATTGTGGGATCATGAGGTGAAG
CAGGAGGAAGAAAACGATTTCAAGTACCGGTCGTGCTCGTGGCAGAAGACGGCATCGCTG
CTGTTTGCCGAGTACATTGTGCTGGCCATCATGTCTTTCCCCTGGTCCTACTCGGTGCTG
GGGTTGGTGCCTGGAATCATCATCACCGTCGGCATGGCGCTCATGGTCTACTACACGGGC
CTCACACTTATGGAGTACGTGCTGCGTAACCCCGATCTCAAGGACATTTGCGAGATTGGC
CAGCATCTATTTGGCTCCCGTGTGGCTTGGTGGCTGACTCTGTGTGGTTTCTTGCTTAAC
AACACCTTCATCCAGGGCCTGCACGTGCTTGTGGGAGCTGAGTGGCTCAACACCATCTCC
AACCACGCTACCTGTACCATTGTGTGGGCCGTGATTATTGCGGTGGTCTCTGCTGTCCTT
ACTCTGCCACGTACGCTATCTGGCTTCACCTACTTTGCTATCTTCTCGGCACTTACTATG
TTCGCCTCGGTGATTATGACCATGGCATTTGCAGGCACCCAGGCACACCCCGATAAGTAT
ATCGACTCTCAACCCGTCACCTGGTCCTGTTGGCCCAAGAAGGGCACCACCTATGTGGAA
GGCATGACCGCCTTTCTCAACATTGCTTTCACTTTCATTGGCCAGGTGTGCTATCCCTCT
TTCATGGCCGAAATGAAGGACCCTCGAGAATTCAAGAAGGTGCTGACCGCTGTCACTGTC
TGCGAAATCCTGCTCTACACCATCACAGGTTGCATCATGTATGTGTACATTGGAAACGAG
TACATGACTGCCCCTGCCTACGGATCGCTCACTGAGCCCTACAAGAAGATCGCCTTCACC
TTTTGTGTGCCCACTATTCTCTTTGCTGGAGTTTTGTACTCTGCAGTCACCTCTCGAATG
GTGTTCGACAAGATTTTCGATAAAGATAGCGTTCACCGAACCCACAACACTGTCAAGGGC
TGGGCAACGTGGATTGGAGTCATCTCCACCACGTGGGTGATTGCCTTCATCATCGCAGAA
GTGATTCCCTTCTTCTCTTCTCTTCTGTCACTGATGTCTTCCATGTTTGGAGCCTGGTTT
GGCTTCATCTTCTGGGGTGTCGCCTACCTGCGAATGAAGAAGGAAGGTCGGGGAAAGGAA
TGGTTCAAGATTCTCAGTCCGTGGGAGAAGTTCAAGGTCTGTATCAACGTCTGTCTCATT
GGAATCGGACTGTACATCTTTGGACCTGGAATCTACGTCACCATTCAGGGCATTATTGAT
TCATATGCTGCCGGAACCGTTGGAGGAGTGTTTACTTGTGCAGACACTGGTTTGTAAACT
ATTTATCGTGCCATACTCGTACCGCTTGTGCTTGTATGACCATATCAAAATATTTATATA
GCAGAAGATCGCATTTGATTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E22506g_CDS-001

Protein length: 479 aa.
Product: Conserved hypothetical protein

>YALI0E22506g_CDS-001 MNSHDTEFLEKDPNIGSYSPPTDGSSLEASDRPLWDHEVKQEEENDFKYRSCSWQKTASL
LFAEYIVLAIMSFPWSYSVLGLVPGIIITVGMALMVYYTGLTLMEYVLRNPDLKDICEIG
QHLFGSRVAWWLTLCGFLLNNTFIQGLHVLVGAEWLNTISNHATCTIVWAVIIAVVSAVL
TLPRTLSGFTYFAIFSALTMFASVIMTMAFAGTQAHPDKYIDSQPVTWSCWPKKGTTYVE
GMTAFLNIAFTFIGQVCYPSFMAEMKDPREFKKVLTAVTVCEILLYTITGCIMYVYIGNE
YMTAPAYGSLTEPYKKIAFTFCVPTILFAGVLYSAVTSRMVFDKIFDKDSVHRTHNTVKG
WATWIGVISTTWVIAFIIAEVIPFFSSLLSLMSSMFGAWFGFIFWGVAYLRMKKEGRGKE
WFKILSPWEKFKVCINVCLIGIGLYIFGPGIYVTIQGIIDSYAAGTVGGVFTCADTGL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG