YALI0E22352g

Overview

Description highly similar to uniprot|P26321 Saccharomyces cerevisiae YPL131w RPL1 60S large subunit ribosomal protein L5.e
Locus type CDS
Locus tag YALI0E22352g

Location

Species Yarrowia lipolytica Positions 2628972..2629984
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1013 (nuc.)
Previous locus YALI0E22341t Next locus YALI0E22374g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E22352g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E22352gYALI0E22352g_mRNA-001YALI0E22352g_CDS-001

Nucleotide sequence

 

>YALI0E22352g
AACAATGTCGTTCAACAAGATTGTCAAGACCTCTGCCTACCACTCTCGGTTCCAGACCCC
CTTCCGTCGACGACGAGAAGGTAAGACCGACTACTATGCTCGAAAGCGACTCGTGACCCA
GCACAAGGCCAAGTACAACACCCCCAAGTACCGACTTGTTGTGCGATTCACCAACAAGGA
CATCATCGCCCAGATTGTCTCTTCCCAGCTCAAGGGTGACATTGTTTTCACTGCCGCCTA
CGCTCACGAGCTTCCCCGATACGGTGTCAAGCACGGTCTTACCAACTGGGCCGCTGCCTA
CGCCGTCGGTCTTCTTGTTGCTCGACGAGCTCTCAAGAAGCTCGGCCTCGACGAGACCTA
CAAGGGAGTTGAGGAGGTTGAGGGTGAGTTTGAGCTCACCGAGGCCGTTGAGGACGGTCC
TCGACCCTTCAAGGTCTTCCTTGATGTCGGTATGACCCGAACCACCACCGGTGCCAAGTG
CTTCGGTGTTCTCAAGGGTGCTTCCGATGGTGGACTTTACGTCCCCCACTCCGCTTCTCG
ATTCCCCGGTTGGGATATCGAGTCCGAGGAGCTCGACTCCGAGACCCTGCGAAAGTACAT
CTTCGCTGGCCACGTTTCCGAGTACATGGAGGAGCTTGCCGATGATGATGAGGAGCGATT
CCGACAGATCTTCCAGTCTTACCTCGACGACGAGGTTGACGCTGACTCCGTCGAGGAGAT
CCTCCAGGCTGCCCACGAGCAGATCCGAGCTGACCCCGACCACAAGCCTACCGCCAAGAA
GACCAAGGCCGAGTACGCTGCTGAGTCCAAGAAGTACAAGCAGAAGAAGCTCACCAAGGC
CGAGCGAGACGCCCGTGTCCAGGCCAAGATCCAGGAGATCCGTGCTCAGCAGTAAGCGCG
ATTTTCGAATCTGTAAAAATAAAACTTTTAACCCATTTTATGCGGAAACGACTGGCCTAA
GACCAGGACATGAAAGCTACCTGTAGATGATTAATACACAGTAATACCCGAGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E22352g_CDS-001

Protein length: 297 aa.
Product: Ribosomal 60S subunit protein L5, putative

>YALI0E22352g_CDS-001 MSFNKIVKTSAYHSRFQTPFRRRREGKTDYYARKRLVTQHKAKYNTPKYRLVVRFTNKDI
IAQIVSSQLKGDIVFTAAYAHELPRYGVKHGLTNWAAAYAVGLLVARRALKKLGLDETYK
GVEEVEGEFELTEAVEDGPRPFKVFLDVGMTRTTTGAKCFGVLKGASDGGLYVPHSASRF
PGWDIESEELDSETLRKYIFAGHVSEYMEELADDDEERFRQIFQSYLDDEVDADSVEEIL
QAAHEQIRADPDHKPTAKKTKAEYAAESKKYKQKKLTKAERDARVQAKIQEIRAQQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG