YALI0E22330g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E22330g

Location

Species Yarrowia lipolytica Positions 2625684..2627224
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1541 (nuc.)
Previous locus YALI0E22308r Next locus YALI0E22341t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E22330g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E22330gYALI0E22330g_mRNA-001YALI0E22330g_CDS-001

Nucleotide sequence

 

>YALI0E22330g
ATGGAATATCGACATCTGGAACTCGCCAGCCATCTGTTTGACTCATGCATCTTTGACGAG
GCTCTCAGCGTGCTCGAGACGGGTCTGCTCCGAACCCCCGTCGAGCTGCCAACGTCCAAA
GAAACAGCCATTCTCATGACTCTCGCGGCGTATCCTCTCTCGCACCTAGGAGGGGAGACC
GTCAAGACTATGACGTACAACAGCGTTCATCGGGGAACACGCGACTGTCAGAAGACGCCT
GGAGCACGCGCCACCGCCCTTCTGAGACGCTTGCTGGAGTTCTCCAAGGGATCGGGACCA
GCCCAAGAACGCATGAAACTTGTGCTACGATCATCTCTCATTGACCATATCGAAGAGGAG
GGCGAGCAATCGAACACTACGTCAACACAAGCGAAGGAAACTCGGACAAGCACATTGGAG
CATAAAGGTTGGGACGATGTGGCACAGGTACCTGTCGATCGTTCAAAACACGAAGGAATG
GATTCGAATCTGCTGAGAGACATGGTGCCTCACAATGAAAATCTGAAGAAACTCTCTGAT
CATCTACGTCCATTGTTGTCGTACACAAGAACCTCTTTGTGGTTATCGCTGTGGACAGTC
TATGGGTACTACTTGGCATGCAGTGGGTCCCCCAGTGCGCCACATCTGAGTGCCTGGGCA
ACCGTTCGACCTCTCTTGCATGTGATCCAGGACATTGTCGAGGCTGACCCTTTCATTTTG
CTCAGTTTCTACGATTCCCACGGCAGCATGTCCGAAATCTGCAACCGAATCCTACCAGGC
AAGGGACGACCCATCACTCCTCTGTTCATTGGAGATGTAGATTTCGGTCCCAATTTCGAT
CCCGAGACAATTGACCATCTTAGGGAGGTTGCATTTGTGGAGAGTATGGTCATACGAGAA
AAATGGGTCGAAATTCTGCGGAGTAACGTCGAATTTTTTGGCGCAGAGCCGAAGGCTGAG
TGGTACCTGCTCGACAGATTCACTACCTTTACTGCTACTCATCATCAGGTGATTCCCCAG
GTCTACCCCTGTGTCTACCTACCAGATTACTACACTGTCTTCATTTTTCATAAGTACATC
AAACGGTGCACTCAACGGGCAGGACATGTCGTCAATGCTGGGCAGTTTTTGGAACGAGTT
TCTAAAGGAGAGGAGAAGGAGTTGTACGATGATGCTATGGATTTACTAGAGGTGGCGTTA
AGTGACAGCCCTGATCGTGGCTTGTTGGAAGGAGGAGCTTCAAAGATTTACTCTCCAGTG
CTTTACGCCTTTTATGGTCATGCTCAATTGTGGGTGAAATTGGCCCTTCAGATCGGTTCT
GACACTTTTTCGCCAAAAGATGTCCTGGAGTATCTTCGGAAGGGGAGGACGACGCGTTTC
CAGGTGTTGTCCTCGTACAACGAGAAGAATGAAAAGGCGCCAGTTCTTTGTAAGCAGGAG
GAGGATGTTCTTACTGCCATTGTCAAAGCCAAGTTGATCCTCAATAAGTATTTGTGAATA
TGGCTGTTATTTATATGTTAATGAAATGATTGAATTCCGGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E22330g_CDS-001

Protein length: 499 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E22330g_CDS-001 MEYRHLELASHLFDSCIFDEALSVLETGLLRTPVELPTSKETAILMTLAAYPLSHLGGET
VKTMTYNSVHRGTRDCQKTPGARATALLRRLLEFSKGSGPAQERMKLVLRSSLIDHIEEE
GEQSNTTSTQAKETRTSTLEHKGWDDVAQVPVDRSKHEGMDSNLLRDMVPHNENLKKLSD
HLRPLLSYTRTSLWLSLWTVYGYYLACSGSPSAPHLSAWATVRPLLHVIQDIVEADPFIL
LSFYDSHGSMSEICNRILPGKGRPITPLFIGDVDFGPNFDPETIDHLREVAFVESMVIRE
KWVEILRSNVEFFGAEPKAEWYLLDRFTTFTATHHQVIPQVYPCVYLPDYYTVFIFHKYI
KRCTQRAGHVVNAGQFLERVSKGEEKELYDDAMDLLEVALSDSPDRGLLEGGASKIYSPV
LYAFYGHAQLWVKLALQIGSDTFSPKDVLEYLRKGRTTRFQVLSSYNEKNEKAPVLCKQE
EDVLTAIVKAKLILNKYL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG