YALI0E22198g

Overview

Description similar to uniprot|Q8TF96 Aspergillus oryzae Chitin synthase
Locus type CDS
Locus tag YALI0E22198g

Location

Species Yarrowia lipolytica Positions 2608400..2613751
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 5352 (nuc.)
Previous locus YALI0E22154r Next locus YALI0E22220g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E22198g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E22198gYALI0E22198g_mRNA-001YALI0E22198g_CDS-001

Nucleotide sequence

 

>YALI0E22198g
ATGAACGTGCCTCCGCTGTCTTCCGCCGCGGTGCCAATATCGACCTCGGCGCTGCTCGGC
ACCCTACACCAGCAGTACAACTCCGCAGATCGTTCGCTTCGAATCGATTCCACCTCGGTG
CTCGTCCTTGACGGCCACATTGACATCGATTTCCTCAACTCCGTGTGGGAGCACGCCTGG
AAGCGTTCCGAAGATCAGAGTATTTTTATTGGGTGAGTACAACTGACGGAACGAGCCACG
GCTCTGGCAGAGGAACTACATCATGAGCGAACGTCTTCATGACCATACGTCCTGCGTCCT
GAATTTCAATGCTACTGCCTCAACGCAACAAAGCTGTTTGGATGCAAGAAGCATTACTTC
TCCCTGATGCTACCTCCAAACCACCTATTGAATGCCACTAACACAGATCATCGATACCGT
CAGCCCCCTCTTCTTTCCTGGCATGTCTGCAAGAGTTCCCCAACATCCCGCCCCAGACAG
CCACGGCCCTCAACGTGCTGGAGCCGTTTCTGACGGCCCAGACACCTGAAAACGTCGACA
CACTGCTGCACAATGGCCTGTCTGTCTGCGTCTCTCTGGACGCCGACGGAAACGTGTGCA
AAACTCGAATCATGCTGTCAGACCTGCCCCTGTCCTCGGTCAAAATGCTGACACACCTGC
CTCACGAAAAGGACAACCGGGCCTTCACCGTTTTCTACAATCTACTATTGGCCGCCACCG
ACTCAGAAATCGACCACTTGTCCCTCAAACCAGCAGACGAATACAATCTTCTCAAGCCCT
CAGGAACATTCACTCTTCCAGAGTACATGCAGCACACAGACGACCATGCCTTGGCCACAG
ACTGGAGAGACTCGCTCAAACAGTGTGGAATCAGGGGCCAGAACCTCAGATCTATTCTCT
CTACACTGTCTGGTCTGCTGCTACTAGGACAAGGCAACGAGTTTGATAAACTAGAAGGAA
CTGCTTTGATTGGCGTGTCTCCTGATACTCTCGAGCAACACTCCACAGATGAGGTGATTG
CGTCGACTTATGTGGCCCTTATCAAAACTGTAGTTGGACTTCTCAACCAGTTTCTGGAGG
GTATGGATATGGCACCTGTCGGAGACTCTGGATCGCCTGAAGACGATATTGTGGCGCTCG
TCAACATTGTCGAGTGCGGGCCTTCCGAGCGATCTGTCATTCTGCGATCTGTTTTTGACG
ACTCGGTTGGTATTTCTAAAGAGCTGGTCGACGAAGGCTTCAGAGTAGTTAAAACACCTC
AAAACGTCACAAAGGTGCTCTCCACCTGGAATAGCGAAAAGATCCACAACCTGCAACAGA
TGCAGCGGCTTCTAATCCCTAATTTCCGCTTCTTCCTCGACGAAAATCTCTCTGTTCTTG
CTCGAGACGACTTTGCCGAGCACATATTGGACGTGACTTCGTTGCTGACCACCTCGCGAA
TCTGGAACATTATCAACGTGGCCGTCAACACAACCGCCAAGGGTGAGATTCTGGAAAAGT
GGACTGGAGCTACCGTCTCTCTGCAGGTACGAAACTGGGCCCTTGTGGAGTGGATCCGAA
AACGGTCTGGTAGAGACTACACGGCCGACTTTGCATTTGACGAGCTGGCCGACAGGTACG
CAACTCTGCATTTTCCCTCGGACTACATGATTCTGCAGGGCTGGGTGGCAGACACGTTTG
GATGGGGCCCTGCGGACTTTGCTGTGGGACAACATCGAGCGTGGTTGAGTGAACCGGCAT
GGAATCACCTGGAGGAGGCCATTGGACAGGGAATGGGTGGCCACGGATACGACCAGCACC
AAGCTTCTTACATGGACCAGATGGGCGGCCATGGAATGAACATGCCCAACATTGTCAATC
CTGCCATGGCCAACATGGGCAACTATGGAGGCGGTCTTACTGAGCGAGAAATGCATACCC
ACGAGGCAGATCTTCACCCCGCGGAGCCCAACATCACCACTATGGTTCCTGACGGAGGCC
TTCCAGGGGGTCCTTATGGTTCTGATGATCCTGATTATCCCCACCCCAGCTATGAGAACC
AGGGTCTTATGGATCCCAGCAAGTACAGAGACGCACAAGAATTTGGAATTGATCCTGAAT
ATCTTGTTGGAACGACAGACACTGTTGTTGTCAAGACTTCAGGTTACCGACGAATGTGGG
TTGCGTTTGTGTGGCTGCTCACCTTCTGGATCCCCTCTCCTCTTCTCAAGTGGATTGGTC
GAATGAAACGACCCGATGTGCGAATGGCGTGGCGAGAAAAACTTGTTATTTTCGCCTTCA
TTTTCCTGATCAACGCGGGTATTGTCTTCTACATGATCTTCCTACAGCGAATCATTTGTT
CCAACTTTGACAAGGCTTGGAACGTCAAGGAGCTGCATACTCACCAGGGAGAGAATGATT
ACTACGTTGGTATTAGAGGTTCTGTTTATGATATGACCAAGTTCTACAGACAGCAGCATT
CTGATAATGGCATGAAGACCAATCCCGACGACATGATGTACTTTGCTGGCCAGGATCTCA
CCGACTACTTCCCTCCTCCTCTCACTGTCGCCTGTCAGGGACTTGTTGAGGACGAGGATG
TGTGGATGAGGTATAACAACACTGTTAACATGATTCCCCAGGCTATTCATTACTCTGGTT
CGTGGAAGGTCCCTGCCGAGGGGCAGGCTCTGCATCAATACACCTGGTACAATGACAAGT
TTGGCCCTAAGATCAAGCAGTATTACAAGGGAGATCTTGTGGTTGCCAAGAAGGATGTGG
AGAAGCAGGGTACACAACAGCAGCGAATGTGGATCATGATGGGTGATCAGATATTTGATT
TTACAAACTACTTCTATACCCTGACCATCAACGACCCCTCTCTGTCTCCTCTGTACAAGA
AGTATGATTTTTTGGCTCCCGAAGTCAAGGATATGATTCAGAACAATGCTGGAACCGACG
TCAAAGACCTTTGGAAGGACTTGGATCTTCCGGACGCTGATAAAATGACCCACATGAGTT
GTTTCAACAACGCTTTTTACCACGGAAAGCTGGATTTCAGAGACTCCGCACGGTGTCAGG
CTGCCAATTACATTCTTCTGGCCATGGCTTGTCTTCTTTCGTCCGTCACTGTCATCAAGT
TCGTTTCTGCTGTTCGTTTTGGCTCATCCAGACAGCCCTCCATGCAGGATAAGTTTGTGG
TTTGCCAGGTTCCTGCCTACACTGAGGACGAAGATGCCCTCCGTGCCGCCATTGACTCTC
TTACCTGCCTCAAGTATGACAACCGACGAAAGCTGCTTTTTGTTATTTGTGACGGTATGA
TTGTGGGTAATGGTAACGACAAGACCACTCCTCAGATTGTCCTTGACATCTTTGGCGTCG
ATCCCAAGGTTAATCCACCTGCTCTTGCTTTTCACTCTGTCGGTGAGGGTTCTCAGCAGC
TCAATTATGGAAAGGTGTATTCTGGACTGTACGAGTTTGAGGGTAACATTGCTCCGTATG
TTGTTGTTGTGAAGGTCGGCAAGGAATCTGAGACTTCCAAGCCTGGTAACCGAGGTAAGC
GAGACTCGCAGGTCATGCTCATGAAGTTCTTCAACAAGGTGCATTACCAAGCCCCCATGT
CTCCTCTGGAGCTCGAAATCTTCCGACACATCAATAACATTATTGGTGTCGACCCTGAGC
TCTATGAGTACATTATGATGGTTGATGCTGATACATCTGTTTCTGAAGACTCCCTGAACC
GAATGGTTTCATGCTGTGCAGACGATTCTCGAATTGCCGGTATCTGTGGCGAAACGTCTC
TTCAAAACGAGCAAAAATCGTGGACAACGATGATCCAGGTGTACGAATATTACATTTCGC
ATCATCTGGCCAAGGCTTTTGAGTCTCTGTTTGGTTCTGTCACCTGTCTTCCTGGATGTT
TCTGTATGTACAGACTTCGAACTGCCGATCGAGGACGTCCTCTGATTATTTCCAACGATG
TGATCAGAGAGTACGCCGAAAACAACGTCGACACGTTGCACAAGAAGAACTTGTTCTCTC
TCGGAGAAGATCGATACCTGACCACCCTCATGTCCAAGTACTTTCCTAAAATGCGATACA
AGTTCACACCAGACGCCCATGCCCAAACTGCTGCCCCCGAGTCCATTGCCATTCTTCTGT
CTCAGCGACGACGATGGATCAACTCCACTGTTCACAATCTGATGGAGCTGCTTCGACTCA
GCCATCTATGTGGTTTCTGTTTCTTTGGCATGCGATTTGTGGTGTTCATCGATCTGATCG
GTACTCTCATGCTGCCCTCTGTGTGCATCTACCTCGTCTATCTCATCTATCTGTTGGCAT
CTCATACCGGAGCCATTCCCATCATTTCTCTTGCCATGATTGGAGGAGTTTACGGTCTGC
AGGCCCTGATTTTCATCATCAACAGAAAGTGGGAGCATGTTGGCTGGATGATTATCTACG
TGGCAGCCTACCCAATCCACTCCTTCCTGCTGCCCATCTACGCCTTCTGGAACATGGATA
ATTTCTCTTGGGGTAATACTCGAGTGGTTGTGGGTGAGAAGGGAGGCAAGCAGCTTGTTT
CAGTTGCCGATGCGGGCTTTGATCCAGCTTCCGTGCCTCTCGAAACCTGGTCGGACTACG
CTCACCGAGTTGGTGTTCCCGGAGCCGAGAGACGTATTGTTCTCAACTCCAGATACGGAA
TGAAGCGGTCTGAAATCTACCGAAACGACGACGAGTACGAAGAGTATATGGATGAGTTTG
GCTACGACATGCAGACTTTTGCCGATGAACAGGCCCGGTTCAACCACGAGCCAGAGAAGG
CCTACCACTCTCGAACAACTTCTCTCATGTCTGGTTTCGGAGGCGATTTTGATGAGGGCA
GTGTTATGCCTGCTCAGTCGACTCACACGGGCCGAAAGGCGCGTCCCAAGTCCGTCATCA
GTCACTACGCCATGTACCCATCTGTCGGTAACCGTGGATCATACTATGATCCCATGGCCG
ACAAGCGAAAGACCATGACTCGATCCACCTCAACTCCTATGTCTCTGATGAGTGGCCGGT
CGTCCGTCATGCTTGGCCATGAGCGGTCTCGATCTTTGGGTGACGCTCTGGGTGCTGATT
TGGATGACCACCAGAAATTGACCATTTCTAACGCCGTCAAGGAGACTCTGGCGGCTGCCA
ACTTGGACACCGTGACGCGACGGCAGCTGCGAGAGGCCGTGGAGGACCGAATGGGAGTCA
CCTTCAGCGCCGAACGGGCTGGATACGTGGACACCGTCATTGATGAGGAGCTTGAGCGAA
TGGAGGAGTGATAATCAAGCGAGTTTTGCATAAGTGTAAGTTATATAAGTTATTATGAAT
TGTTGGTGTGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E22198g_CDS-001

Protein length: 1699 aa.
Product: Chitin synthase, putative

>YALI0E22198g_CDS-001 MNVPPLSSAAVPISTSALLGTLHQQYNSADRSLRIDSTSVLVLDGHIDIDFLNSVWEHAW
KRSEDQSIFIGSSIPSAPSSFLACLQEFPNIPPQTATALNVLEPFLTAQTPENVDTLLHN
GLSVCVSLDADGNVCKTRIMLSDLPLSSVKMLTHLPHEKDNRAFTVFYNLLLAATDSEID
HLSLKPADEYNLLKPSGTFTLPEYMQHTDDHALATDWRDSLKQCGIRGQNLRSILSTLSG
LLLLGQGNEFDKLEGTALIGVSPDTLEQHSTDEVIASTYVALIKTVVGLLNQFLEGMDMA
PVGDSGSPEDDIVALVNIVECGPSERSVILRSVFDDSVGISKELVDEGFRVVKTPQNVTK
VLSTWNSEKIHNLQQMQRLLIPNFRFFLDENLSVLARDDFAEHILDVTSLLTTSRIWNII
NVAVNTTAKGEILEKWTGATVSLQVRNWALVEWIRKRSGRDYTADFAFDELADRYATLHF
PSDYMILQGWVADTFGWGPADFAVGQHRAWLSEPAWNHLEEAIGQGMGGHGYDQHQASYM
DQMGGHGMNMPNIVNPAMANMGNYGGGLTEREMHTHEADLHPAEPNITTMVPDGGLPGGP
YGSDDPDYPHPSYENQGLMDPSKYRDAQEFGIDPEYLVGTTDTVVVKTSGYRRMWVAFVW
LLTFWIPSPLLKWIGRMKRPDVRMAWREKLVIFAFIFLINAGIVFYMIFLQRIICSNFDK
AWNVKELHTHQGENDYYVGIRGSVYDMTKFYRQQHSDNGMKTNPDDMMYFAGQDLTDYFP
PPLTVACQGLVEDEDVWMRYNNTVNMIPQAIHYSGSWKVPAEGQALHQYTWYNDKFGPKI
KQYYKGDLVVAKKDVEKQGTQQQRMWIMMGDQIFDFTNYFYTLTINDPSLSPLYKKYDFL
APEVKDMIQNNAGTDVKDLWKDLDLPDADKMTHMSCFNNAFYHGKLDFRDSARCQAANYI
LLAMACLLSSVTVIKFVSAVRFGSSRQPSMQDKFVVCQVPAYTEDEDALRAAIDSLTCLK
YDNRRKLLFVICDGMIVGNGNDKTTPQIVLDIFGVDPKVNPPALAFHSVGEGSQQLNYGK
VYSGLYEFEGNIAPYVVVVKVGKESETSKPGNRGKRDSQVMLMKFFNKVHYQAPMSPLEL
EIFRHINNIIGVDPELYEYIMMVDADTSVSEDSLNRMVSCCADDSRIAGICGETSLQNEQ
KSWTTMIQVYEYYISHHLAKAFESLFGSVTCLPGCFCMYRLRTADRGRPLIISNDVIREY
AENNVDTLHKKNLFSLGEDRYLTTLMSKYFPKMRYKFTPDAHAQTAAPESIAILLSQRRR
WINSTVHNLMELLRLSHLCGFCFFGMRFVVFIDLIGTLMLPSVCIYLVYLIYLLASHTGA
IPIISLAMIGGVYGLQALIFIINRKWEHVGWMIIYVAAYPIHSFLLPIYAFWNMDNFSWG
NTRVVVGEKGGKQLVSVADAGFDPASVPLETWSDYAHRVGVPGAERRIVLNSRYGMKRSE
IYRNDDEYEEYMDEFGYDMQTFADEQARFNHEPEKAYHSRTTSLMSGFGGDFDEGSVMPA
QSTHTGRKARPKSVISHYAMYPSVGNRGSYYDPMADKRKTMTRSTSTPMSLMSGRSSVML
GHERSRSLGDALGADLDDHQKLTISNAVKETLAAANLDTVTRRQLREAVEDRMGVTFSAE
RAGYVDTVIDEELERMEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG