YALI0E22088g

Overview

Description weakly similar to uniprot|P10863 Saccharomyces cerevisiae YER011w TIR1 cold-shock induced protein of the TIR1P,TIP1P family
Locus type CDS
Locus tag YALI0E22088g

Location

Species Yarrowia lipolytica Positions 2604642..2605533
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 892 (nuc.)
Previous locus YALI0E22066g Next locus YALI0E22110r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E22088g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E22088gYALI0E22088g_mRNA-001YALI0E22088g_CDS-001

Nucleotide sequence

 

>YALI0E22088g
ATGTCCAAGTTCTCCGTTGCCGCCATTGCCGCCATCCTGGCCACCGCCGCTGTTGCCGCC
CCCTCTCCCCAGGACACTGCCACCTACCAGTGCCATGCCACCTGTGGTAACATGATTCTG
GACGCCCGAAAGTGCGCCCAGGGCGACTCTTACGACAAGGACTGTCTGTGTGACAACGGA
ACTCCTTTCCAGTCTGCCCTTGACCCCTGCCTGGACTGTGGCTCTACCCTCTGGAGCGAC
TACGGCAAGTTCCTCGAGCCCCCTCTTGCCTTCTGTGGATTCCCCACTCAGCCCAAGCAG
CAGAACGCCTCCGCCGCCTCCTCCGCTGCCCCCGCTTCCTCCGCCGCTGCTGAGTCCTCC
GCTGCTCCTCAGTCTTCTGCCGCTGCTGAGACCTCTGCTGCTCCCCAGTCCTCTGCTGCT
CCCCAGTCTTCTGCTGCCGCCGAGACCTCCGCCGCCGCCGAGACCTCCGCCCCCGCCGAG
ACCTCCGCCCCCGCCCCCGCCTCTTCTGCCGCTGAGTCCAAGCCCGCTTCTTCTGCTGCT
CCCGCCTCTTCTGCCGCTGAGTCCAAGCCCGCCTCTTCTGCCGCTGCCTCTTCTGCCGCC
TCCAAGACCGCTGAGAAGCCCGCTGCCTCCTCTGCTGCTGCCGAGTCCAAGCCCGCTGCC
TCTTCCGGCGCTGCCCAGGCCTCTTCCTCCGGCTCTGCTCCCCCCCAGGCCAACGCTGGC
TCCAAGGCCTCTTACGCCGTCGGTGTTGCCGGTGCTGCCCTCGTTGCTGCTCTCATCTAA
GATGCCCAGTAACATCTAATCTGGCCTGCTAGCACGGTGGTGCCTATGTAACGACGTAAT
GATAACTCTTAATTAATGCCTGTAAGTGTACCCATTTTCTGATCTTTCAGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E22088g_CDS-001

Protein length: 260 aa.
Product: Conserved hypothetical protein

>YALI0E22088g_CDS-001 MSKFSVAAIAAILATAAVAAPSPQDTATYQCHATCGNMILDARKCAQGDSYDKDCLCDNG
TPFQSALDPCLDCGSTLWSDYGKFLEPPLAFCGFPTQPKQQNASAASSAAPASSAAAESS
AAPQSSAAAETSAAPQSSAAPQSSAAAETSAAAETSAPAETSAPAPASSAAESKPASSAA
PASSAAESKPASSAAASSAASKTAEKPAASSAAAESKPAASSGAAQASSSGSAPPQANAG
SKASYAVGVAGAALVAALI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG