YALI0E21802g

Overview

Description weakly similar to uniprot|Q9USK2 Schizosaccharomyces pombe Hypothetical 51.0 kDa protein
Locus type CDS
Locus tag YALI0E21802g

Location

Species Yarrowia lipolytica Positions 2573742..2576436
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2695 (nuc.)
Previous locus YALI0E21780g Next locus YALI0E21824g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21802g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21802gYALI0E21802g_mRNA-001YALI0E21802g_CDS-001

Nucleotide sequence

 

>YALI0E21802g
ATGATCACGGTCACGCCCGGGGAGTTGGCAACCATCGACGACGCTCTCACCGACCTGCTG
CTGGAGCGCGTATTCTACTGGGCCGAGGTCCGCAAGGCCTCCGTGCACTACAAGCCGTTA
CGCGGCATTTCAGATCGTCATATCCACGACCTGGTGCGCTCCATTGCCGCCTGCGAGACC
GGAGCTGCGGCTAATCTGGCGGTGAAGAAGGCCACCAACGCGTTTCTGGAGCTCAAGGAG
GTCAGAGGATACCGAGGACGGCTTAGTCCACTGGCTTACGAAGAGTTCCAAAGACACACA
GTTCGATACCTGACCATCTACAAGGCGTCGTGCGGGTTTGAAATCAACGTGTCCATGCGT
TACAAGTGCCGCTCCAACCGAGGAGAGTCCTGTGTCATCTCCAGAGTCAGATACAACCGG
GGAGACGAGATTGTCGGTCTGTCTGGTTGTCTGGCCAAGATGACCAAGGACGAAGAGCTG
GCCCTTGCCAACGACTTTTCTGTGCTCCACTCCTCACGAAGAGGCGGAAACTGTCTCATG
CTAGGCCCTGCTCGATTTGTCAACCACGACTGTAGTGCCAACGCTCGGTTTGTTCCTGTT
CCTTCAGGCATGGTGATCCAGGCTGTCAAGCCCATCAATGTGGGCGACGAAATCACTGTC
AAATACGCAGAAAATTATTTCGGACGCAGAAACAAGGAGTGTCTGTGCCAGACATGCGAG
GAGAACTCCAGAGGCCTGTATGGAAGCCCACAGGAGTCTAGTGAGGAGGAGAGCGACGAC
GACATGGATGAGCTAACAAAAATTGAACTGCAACGGAGAAAGAAACGGCAAGAGCAGAGA
GAGGGAGGGACCCCCGAACTCAGAGAGGGAGGTCGAGGCTCGTCAGAATCATCTAGAGAA
ACTTCGGAAGAAGCTATTGAGATCTCCACCAGCAAGAACTGGCCATTGATCCCTAAAATC
GAGTCTCACACAGCAGATAGTACCCCTCTCCCTGTACCTGTTGGAGAAGTGTCTGAAGCC
ACTGTCACTGAGGTGTCCACTGTTGTTCCTGCTCAAGAGGCTATTCCTGTTAATGAATCA
ACAACAGCTTTGTCGCAGTCGTCAAATGAGTTTCAGGACCCAACGATCGACCCCATTTTG
AATGGGGCCAGTGCTGAAATCAGGTTCCCGTCTCTACCCAGCCCAGATACCACCACATCA
CCCGAATCACAAGTTCCGCCGTTCATTCAACCAAAAAGTGCCCGACGAAACCACCACTAT
CTTGGCATGCACAACACGGACGAACGAGTGCGGTTCAACGACCGACTGTCGGTTCTAGAC
GAGAGAGGCGGAAGTGAGGATATGGAGAGCTGCCTGGTGAGCGGCAGTGAGTCGCGAGAC
GATAGCACTGCTATGTCGCGAGATGAGGAGTCTTCTCGTGACGACGGTGACGGTTCTCGT
TCCAAACGGTCCAAACGACATGTACGGGCTCAGCGCAAGAACTCAGGATCATGGTCTTTC
AGCCAGGAAGATCTCAGCTTTGACAGACTGTGCAAGGCTGCTCGGGAACAGGCCTATGAT
CCTTCCAGGTATGCTCTGACGGGGGTGTATGGCTTCTCCGTTTCTGGGGCAACGCAGACG
TGCGTGTCTTGTTGTTCAGTCTACAATCTCACTGACGGGCCCAAGACACTTGGCCACTTT
TGTCCTCGGTGCCACAGACATGCTGCTATCCACAGCTTTGCCTGGCCGTATACTAACCAT
AAGCATGCCCTTCCCCTGTGTCTGCTAATGATGCGGCCTCCAAAGAAGCTTGAGGACGAG
GACTGGGGTCTCTCCAAGCCACAGGTGGCTCAGCAGTTTGGTGCCAAAAATCGTAAGATT
TTCGAGGAGGACGGTTCGTTGGTGCAGAAGAAGCGCAAGTCGCTGGCCTGGTCGTGGGAG
TACACCAAAGAGGAGCCTGCCCAGGAAATCACCAGTATGCGCATTGAGGACATGAGTCCG
AAGGAGCTGAAGAAGTGGAGTCAGGCCGGTCGACAGACACGGTCTGGACGGGTTTCTATG
CTGCCGGAGAAACCCAAGCGGTCGAGAAAGTCGGCTCCTGAGCCTGTTGAGATGCGGGAC
AATGTGGCTCAGCTTTCACGAGAGGAACGAGCTTGGAAGAGAGCTCGAAGGGGAACCGTG
GGACATGAGAAAGTGGAAGTAAATACTCCGACAGTAGAAACTCCGTCAACAGGCACCCCG
AAGGTGAAGAAGCTACATTGGAAGCAAAAGCTGGCAATGGAGAGGAGACAGAAGGAGGCG
GAGGCGGCTGAGGTGGCTGAAACCAGAGTTGCGGACGGTGTTGATGCATCTACTCCTAGT
CCTGCTGGGTCCACGCCGACTCCTAGAGGAAGAGGTAGACCCCGAAAGTCTTCTCGGGAA
GAAGAAATCCCTCCCGAGAAGACACCTGAGGCGAAGAGACCTAGTCCAGCAGCAACTAAG
ACTCCATCGATGTCTCCAAAAGTGAAGAAGGAGCCTCTCAGTATGTCGTTTTCAATGTCT
CCAACGAGCCGGTCAGGACGGGTTCGAAACCCCACGGAAAAAGCATTGCAGTTGATGGAA
CAGGGAGAGTATGTGATTTGAAGAGGAGAAAAGGGGAATTACTAATGGTCGGATGGGTTG
GATATGTATTTGTACTGTAAATTTATTATGAGTTATGGCTATTTGGCATACAAGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21802g_CDS-001

Protein length: 867 aa.
Product: Conserved hypothetical protein

>YALI0E21802g_CDS-001 MITVTPGELATIDDALTDLLLERVFYWAEVRKASVHYKPLRGISDRHIHDLVRSIAACET
GAAANLAVKKATNAFLELKEVRGYRGRLSPLAYEEFQRHTVRYLTIYKASCGFEINVSMR
YKCRSNRGESCVISRVRYNRGDEIVGLSGCLAKMTKDEELALANDFSVLHSSRRGGNCLM
LGPARFVNHDCSANARFVPVPSGMVIQAVKPINVGDEITVKYAENYFGRRNKECLCQTCE
ENSRGLYGSPQESSEEESDDDMDELTKIELQRRKKRQEQREGGTPELREGGRGSSESSRE
TSEEAIEISTSKNWPLIPKIESHTADSTPLPVPVGEVSEATVTEVSTVVPAQEAIPVNES
TTALSQSSNEFQDPTIDPILNGASAEIRFPSLPSPDTTTSPESQVPPFIQPKSARRNHHY
LGMHNTDERVRFNDRLSVLDERGGSEDMESCLVSGSESRDDSTAMSRDEESSRDDGDGSR
SKRSKRHVRAQRKNSGSWSFSQEDLSFDRLCKAAREQAYDPSRYALTGVYGFSVSGATQT
CVSCCSVYNLTDGPKTLGHFCPRCHRHAAIHSFAWPYTNHKHALPLCLLMMRPPKKLEDE
DWGLSKPQVAQQFGAKNRKIFEEDGSLVQKKRKSLAWSWEYTKEEPAQEITSMRIEDMSP
KELKKWSQAGRQTRSGRVSMLPEKPKRSRKSAPEPVEMRDNVAQLSREERAWKRARRGTV
GHEKVEVNTPTVETPSTGTPKVKKLHWKQKLAMERRQKEAEAAEVAETRVADGVDASTPS
PAGSTPTPRGRGRPRKSSREEEIPPEKTPEAKRPSPAATKTPSMSPKVKKEPLSMSFSMS
PTSRSGRVRNPTEKALQLMEQGEYVI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG