YALI0E21758g

Overview

Description weakly similar to uniprot|Q8X0C0 Neurospora crassa NCU06821.1 probable cro1 protein
Locus type CDS
Locus tag YALI0E21758g

Location

Species Yarrowia lipolytica Positions 2568130..2570318
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2189 (nuc.)
Previous locus YALI0E21714r Next locus YALI0E21780g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21758g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21758gYALI0E21758g_mRNA-001YALI0E21758g_CDS-001

Nucleotide sequence

 

>YALI0E21758g
ATGGACGAAGTGACCAACAAGACAGAAAAGCTCGCATTGGAGAGCGCAGCCGACCAATTG
AAAGAGCTCAAGGCAATTGTGAGCGCTGAGAAACCCGATCTGACGAAAATCTCCCCAGAA
GCATTCGCCAAGGCCGTCAAAGAGGACCCCAAGCAGTGTCTACAAACATGTGCTGAACAC
GGACAGTTTGGAGCTGTAGCCAAGCTCGACATTCCACAGGACACGGTTATTGACGACTCG
TTGTCGCTGCTCAAAACAAATCCGGACTTTTATCTTCAGGTGATTTGCATGCAAAAGAAG
CCATTCGACAAAGCCACGTTCAAGAAACTGGTGGAAATCGCTCCCAGTTATGTTTCCAGT
TTGGAGACGGAAGATCGGACAACTGCACTGGCAGTTATGATCATTGCGCGTCTATTTGAG
GTGTTTCCCGCCGAGGCTGAGAAGGAATTGGGCTTTCAGATTGAGAACTTTCTGCTTGCA
GAAACCACAGATAGCGTCATTACTGCCTTTTCACTACTGTCAGTACTCTTCTCGATTGAT
AGCGGCCGAGCAGCCGATATCTTCGCTTCGGAATGGATGCAGCAGTTCAAAATGACCCCT
TCGATGACACATTCCGAACCTACCATGCTCGCCATTCTAGACTGTCTGTCTTCAGCCTGT
GTTTCGAAACAGTGCCGAGAGATGATTGGCGCAAAGTTCGAGAAGGACCTCGTGCAATTG
CTGCAAGCAACTGTTTCGCAAAAAATCAAATTGTACACTGCCACCATTCTCACCAAGCTG
AGCTTCAAGCCAAAGGATCCCAAGCCCAAGGGAAGCGAGCCCCAGCAGGAGGAGCTACTT
TCGACCCTGGAGTCGCTATCGTCCATTTTTGAGCAGTCTGTTCCCGACAAGGATCTCAGA
AAACAGGCTGTGGAGGGTCTCGCGTATACCTCTCTGGACCAGAATGTGCGAATGGGCATC
ATTGTGAACGACGAGCTGCTCAAACAGCTCGTGGAGTGTCTCAAGTCCAACGACTCGTCG
CTGGTCTACGGAGCCCTGTCTGTGTTTGCCAACTTGGCAGTCTATCCTCCTCGTCTGTCT
CCTGATCAAAAGAAAGTGGCTGACTTGAAGAAGTATGCCGAGGCTGTCCAGGAGAAAGAA
GAGGAGCTTGCACAGATTACCAAACAGACTGACAAACGTTGCAAGATTCTCGTAGACTTG
AAAATCCCAGCTATTCTGTCAGCTCTAGTTAACAAGCTGAAACCCAATGCTCGTTCTGTA
GCAGGTACTATTCTGACATCCCTGGCCGAGCAAAAGAGTCTGAGAGGCGTTCTGACGCAG
CAAGGAGCGGTGGCTACGCTTCTGTACATACTTTGCGACACTGACGCGCAGCTGGAGCCC
GCCTCCAAGGTATTCATCACCTCGGGGCTGGCCAAGCTACTGGTTTCTACCAATCCTAGT
CTTGTTTTCGGCGCCAAAATCTCAGCCTCGGTGGCTGTCATTCCTCTGTTGGCCAACATA
GACAACGACTTTTCGCCCCTCCCTCTTTTGGATTCATTCGAGTCTGCCCTAGCTCTAACC
AATCTCGCCTCTTTTGACGATACCACCCGAAAGGTGATTATCAGCCACGGATGGGAGAAG
ATTGAAAACATGATGACTTCGCAGAACCCCATGGTGCAACGAAGTGCCGTGGAGCTGGTC
TGCAACCTATCGCTTTCGCCCTACTGTGCCGAGAAGTATCTTGACGGAAGTAAGGCAGCC
AACTCGCGTCTCAATCTACTGGTTGCTCTGACAGATCTATCTGATGAAGCTGGACGTCTA
GCGGCTATGGGTGCTCTAGCCATGCTGTCCGAGTGGGATCCTGCTCCTCCCATTATGGTC
AAGAACGAGAAGCTGATGGCCTGTCTGCAGCGCATTCTGGACAAAGATACAGAGGTGGAG
ATGATCTACCGAGCTGTGGCGTTAGTGGGCAATCTTTCGCAAAAGGAAGGAGGCAAATTG
GGCTCTCTCAAACCTGGCCTAGTGAGAGTCAAGTCTATGGTGAAGGACATGACAGCAGAG
GTCGATGACATTCTTACTAGACTCAAGTAGAGGGCCAATTAGAACACTGTAGACACGGCT
AAAAAACGATTGATCAAAGAATGTGTCCGAGCTACTACAAGAAGGACAGTATGTAGGTAC
GCGGTAGCTGCAGTCACACGATGTCTCGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21758g_CDS-001

Protein length: 690 aa.
Product: Conserved hypothetical protein

>YALI0E21758g_CDS-001 MDEVTNKTEKLALESAADQLKELKAIVSAEKPDLTKISPEAFAKAVKEDPKQCLQTCAEH
GQFGAVAKLDIPQDTVIDDSLSLLKTNPDFYLQVICMQKKPFDKATFKKLVEIAPSYVSS
LETEDRTTALAVMIIARLFEVFPAEAEKELGFQIENFLLAETTDSVITAFSLLSVLFSID
SGRAADIFASEWMQQFKMTPSMTHSEPTMLAILDCLSSACVSKQCREMIGAKFEKDLVQL
LQATVSQKIKLYTATILTKLSFKPKDPKPKGSEPQQEELLSTLESLSSIFEQSVPDKDLR
KQAVEGLAYTSLDQNVRMGIIVNDELLKQLVECLKSNDSSLVYGALSVFANLAVYPPRLS
PDQKKVADLKKYAEAVQEKEEELAQITKQTDKRCKILVDLKIPAILSALVNKLKPNARSV
AGTILTSLAEQKSLRGVLTQQGAVATLLYILCDTDAQLEPASKVFITSGLAKLLVSTNPS
LVFGAKISASVAVIPLLANIDNDFSPLPLLDSFESALALTNLASFDDTTRKVIISHGWEK
IENMMTSQNPMVQRSAVELVCNLSLSPYCAEKYLDGSKAANSRLNLLVALTDLSDEAGRL
AAMGALAMLSEWDPAPPIMVKNEKLMACLQRILDKDTEVEMIYRAVALVGNLSQKEGGKL
GSLKPGLVRVKSMVKDMTAEVDDILTRLK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG