YALI0E21692g

Overview

Description highly similar to uniprot|P40413 Saccharomyces cerevisiae YJR064w CCT5 T-complex protein 1, epsilon subunit
Locus type CDS
Locus tag YALI0E21692g

Location

Species Yarrowia lipolytica Positions 2564771..2566679
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1909 (nuc.)
Previous locus YALI0E21670g Next locus YALI0E21714r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21692g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21692gYALI0E21692g_mRNA-001YALI0E21692g_CDS-001

Nucleotide sequence

 

>YALI0E21692g
ATGGCCCAGCAACAGACAATGCCCATGCCTGACATGTCCAATGCCATTGTGGCTCAGGAC
GAAATGGGACGGCCTTTCATTATTGTCAGAGAGTGAGTACAAACGACACGAGAGGAGGAA
GCTGAAGGTGGCAAGACACAGTCTAGGACACGCTAACATAGCCAAGGAAAGAAGAAGCGC
GCACACGGAATTGAGGCCGTCAAGAGCCACATCCTGGCCGCTCGAACCGTGTCGGATATC
GTCAAGACCTCCCTGGGTCCCCGAGGACTGGACAAGATTCTCATTTCTCCTGATGGAGAC
ATCACCATCACCAACGACGGAGCCACCATCATGAGCCAGATGGAGATTGAGCACCAGATT
GCACGACTTCTGGTCGAGCTCAGTCGGTCTCAGGATGACGAGATCGGAGACGGAACCACC
GGTGTTGTGGTTCTGGCCGGAGCTCTGCTTGACCAGGCCTACGAGCTTATCGAGAAGGGT
ATCCACCCCATTCGAATTGCCAACGGTTTCGACCAGGCCTCCAAGGTTGCCGTGGAGCGA
CTCGAGCAGATTGCCGACACCGTGCCTGTATCTGACGTTGACAAGTCGACTCTCATCAAG
GCCGCCAAGACCTCCCTGGGCTCCAAGATTGTGTCCAAGGCCCACGATCTCTTCACAAAC
ATTGCCGTGGACGCTGTTCTGGCTGTGGCCGACCTCGACCGAAAGGACGTGGACTTTGAG
CTCATTAAGGTCGATGGCAAGGTCGGAGGATCCCTCGAAGACACCAAGTTTGTGCGAGGA
GTGGTTCTGGACAAGGACATGTCGCACCCCCAGATGCCCCGAGACATCACCGACGTCAAG
ATTGCCATTCTGACGTGCCCCTTCGAGCCCCCCAAGCCCAAGACCAAGCACAAGCTCGAT
ATTAGCTCCGTCGACGAGTTCCGAAAGCTGCAGGCATACGAGCAGAAGACCTTTGAGGAC
ATGGTGGCCAAGGTCAAGGCTACTGGTGCCAATCTGGTCATCTGCCAGTGGGGATTTGAC
GACGAGGCTAACCATCTGCTGCTTCAGAACGGTATTGCTGCCGTTAGATGGGTTGGAGGA
CCTGAGATTGAGCTGCTGGCCATTGCCACCGGCGCCCGAATCGTGCCCCGATTCGAGGAT
CTGTCTGCCGCTAAGCTCGGCCACGCTGGACGAGTGCGAGAGCTCGAGTTCGGAACCACC
CGAGACCGAATGCTGGTTGTCGAGGAGTGTGCCAACCCCCGAGCCGTGACTGTCTTTGTG
CGAGGCTCTAACAAGATGATTGTAGATGAGGCCAAGCGAGCTCTGCACGACGCCATCTGT
GTGGTTCGAAACCTGGTGCGAGACAACCGAGTTGTTTACGGAGGAGGAGCTGCCGAAATT
GCATGTGCCATTGCCGTTGCCGAGAAGGCCGACCACATGACCGGAATCGATCAGTACGCC
TTCCGAGCCTTTGCCAACGCGTTGGAGGCCATCCCTACAGCTCTGGCTGACAACTCGGGC
CTTTCTTCTATTGAGAGTCTGGCTTCTGTCAAGTCGCGCCAGGTCAAGGAGGGCAACTCC
CGACTGGGCATTGACTGCCTCAACACTGGCAACAACGACATGCGAGAGAACTTTGTGGTG
GATCCTCTGATTGGAAAGCGACAGCAGCTGCTGCTGGCCACCCAGCTGACCCGAATGATT
CTCAAGATCAACGATGTCATTGTCACCGGCACTGATGATTATTAAACGGAGAGGGGCGAG
TAGGAAGGACGATATCATGAGTATAAAATAGGATTATTGATAGAGGTTTGAATTAGTGAG
AGTAATGAGAGGGGTATGACAGAATGAGGGAGCTGGTGACAGTACTGTTCTCACAGCACA
CAACACTTCGATCTCATACACATGTACTTGTACGAATTGAAGGTACAGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21692g_CDS-001

Protein length: 552 aa.
Product: Subunit of the cytosolic chaperonin Cct ring complex, putative

>YALI0E21692g_CDS-001 MAQQQTMPMPDMSNAIVAQDEMGRPFIIVRDQGKKKRAHGIEAVKSHILAARTVSDIVKT
SLGPRGLDKILISPDGDITITNDGATIMSQMEIEHQIARLLVELSRSQDDEIGDGTTGVV
VLAGALLDQAYELIEKGIHPIRIANGFDQASKVAVERLEQIADTVPVSDVDKSTLIKAAK
TSLGSKIVSKAHDLFTNIAVDAVLAVADLDRKDVDFELIKVDGKVGGSLEDTKFVRGVVL
DKDMSHPQMPRDITDVKIAILTCPFEPPKPKTKHKLDISSVDEFRKLQAYEQKTFEDMVA
KVKATGANLVICQWGFDDEANHLLLQNGIAAVRWVGGPEIELLAIATGARIVPRFEDLSA
AKLGHAGRVRELEFGTTRDRMLVVEECANPRAVTVFVRGSNKMIVDEAKRALHDAICVVR
NLVRDNRVVYGGGAAEIACAIAVAEKADHMTGIDQYAFRAFANALEAIPTALADNSGLSS
IESLASVKSRQVKEGNSRLGIDCLNTGNNDMRENFVVDPLIGKRQQLLLATQLTRMILKI
NDVIVTGTDDY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG