YALI0E21472g

Overview

Description similar to uniprot|Q7S6R7 Neurospora crassa Hypothetical protein
Locus type CDS
Locus tag YALI0E21472g

Location

Species Yarrowia lipolytica Positions 2547796..2548708
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 913 (nuc.)
Previous locus YALI0E21461r Next locus YALI0E21505g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21472g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21472gYALI0E21472g_mRNA-001YALI0E21472g_CDS-001

Nucleotide sequence

 

>YALI0E21472g
ATGTCGCACGCCCAGGTTCTCAAACACGTCCGAGCCGTGAGTATAGAACCCCAAAAGGCC
CCAATTGGCCTGTTACACGTTACTAACGCAGGTATGGGGAGATTTCCTCCAGCTCAGTGG
CCTAGAGCCCACGCTGTTGTCTCAGGTGAGTATGGGAGAGTGAGAGATGGTACTGGTACG
TTCGGTGAGTTTTCGGGGAAGAGGCCCTGGGCTATGGTTGATTGTAACTCAGAGATAGTC
TACAGACACATTCCCTAGTTCCAAGTTTGTGATCATCGAATCTCTACATGAGATGTTCGA
GCTATCTTTAAAATACAGACGGAATATGACTTCAGTTGCGTACCAGCCATATCAATAATA
CCGAAGTCACACCGAATTTGCAGCCAGTACTTCAATGGCCCTCAGGTAACCGCCAAATTC
CACGCCACCCCCTCTGTCCGCCATTAACACAGCTTTCCATCGACTCTGCTGAACGCGGAA
AGGTCCGACTCGGCCTCACCGTCGCCAAGGAGCACACCAACCGGCTTCAAATCCTTCACG
GAGGCACAATTGCGTCTCTGGTTGATCTCGGAGGCTCCATGGCCGTCGCTTCTTCCGGAG
CTTTCGCTACCGGCGTGTCTACCGACATCAACGTCTCCTACATTGGCTCCGGAGGCAAGA
TTGGCAACAAGATCATCATGGACTGTTTGTTGGATAACATGGGCCGATCCCTGGCCTACA
CCTCCGTTGACTTCTACAACGCCTCGGATCTATCTCTGTTTGCTCGAGGACGACACACAA
AGTACATCAAGCACGCCCTCAAGGACCCTCGGAATGTCGAGTTTTGAGCATTCACAACAA
TTGCCGTGACATCTACATTATAGATCTATACATTTGTGAGTTATTTAAAAAAAAAAACAA
CCAGAGTCAACTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21472g_CDS-001

Protein length: 155 aa.
Product: Conserved hypothetical protein

>YALI0E21472g_CDS-001 MSHAQVLKHVRAVWGDFLQLSGLEPTLLSQLSIDSAERGKVRLGLTVAKEHTNRLQILHG
GTIASLVDLGGSMAVASSGAFATGVSTDINVSYIGSGGKIGNKIIMDCLLDNMGRSLAYT
SVDFYNASDLSLFARGRHTKYIKHALKDPRNVEF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG