YALI0E21241g

Overview

Description weakly similar to uniprot|Q07824 Saccharomyces cerevisiae YLL028w TPO1 polyamine transport protein
Locus type CDS
Locus tag YALI0E21241g

Location

Species Yarrowia lipolytica Positions 2531576..2533539
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1964 (nuc.)
Previous locus YALI0E21219g Next locus YALI0E21263r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E21241g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E21241gYALI0E21241g_mRNA-001YALI0E21241g_CDS-001

Nucleotide sequence

 

>YALI0E21241g
ATGTCCATCCACTCGTCATCTTCCCATGACAAGGACATTGTCCAGATTGTGGAAGACTCC
ATAGGGCTGTCAAAAACAGATACCCGCTCATCGCATGTTTCCAGGGCCTCCAAGGCCTCC
CGAGCTGCCTCGGACTACCAGATAGACCACATTTACGGCGACATGGACCGTCGAGAAATC
ACGCTGGCCAGGCAAATCACCCGAGAAACAATTCTTAGTGCCTACCAGGAAAAGGTGCGG
TCCCGTGCCTCTTCAATTATCAACGGCAAAATCGACCCGTCTACAGCGCCTCCTCCTCCT
CTCAAAAACGGAGGAGATGGCTCACAGTTTTTGGATGTGGATCCAGAACTGGTTACGTGG
GACGGAGACGAGGACCCTGAAAACCCCCAGAACTGGCACACATACAAAAAGGTGGCTACA
ACTGTCATTGTGTCACTCTACACATTCGTTTCTCCTCTCACATCTTCCATCATTTCTCCT
GCAGTGCCTGCCATTGCTGCCGAATACAACGAAACGCGGCCTGTCGTGCAATCGCTCATG
GTGTCCATCATGATTCTCGCCTGGGCCATTTGTCCACTGTTTGTGGCGCCTTTGTCGGAA
ATGTACGGCCGAAAAATCGTCATGGACGTGTCCATTCTAGTGCTACTGGCCTTCACTCTT
GGTTGTGGAGGGGCTCAAAATACAGCCCAGATGGCCGTCTGTCGATTCTTTGCAGGCGTG
GGAGGTGCTGCTCCACTCTCTGTGGGCGCTGGTGTGCTGGCAGACCTGTATTCGCCCCAA
AAACGAGGTACTGCGTTGGCCTGGTACGCTATTGGACCCACTGTAGGCCCCGTTGTCGCT
CCTATTGCTGCAGGATGGATCGTGCAAGAAACGAACACGTGGAGATGGGTCATGTGGGTC
GACGGTATCTTTATTGGATGTGTCGCAGCATGTGGGTTTCTTTTTTACTCGGAAACTTAT
CCTCCTGTTTTGCTGCAGAGAAAGGCCAAGAAACTGAGAAAGGAGTCTGGAAATGACGCC
CTGCATACGATCTACGACATTGCAAGTGAACCTCTTTCTTCCAAACTCTACACTTCCATG
ACCCGACCTTTGCGTATCCTTGTGACCCATCCCATTGTTATGGGTCTCGGTCTGTTCATG
GCTTTCACTTACGGCTTCATGTACATTATGATTGTGACTTTCCCTGCTCTATGGACCGAG
CGGTATGGCTTTTCACTGGGTATCATGGGTCTGACCTTCCTAGGCATGGGTATCGGCTTT
CTGGCAGGCACATGGTTCTGGTGCGTCTACACCCAAAAAGTCTACATTAAATTACGAGAC
CAGAATGGTGGAGTTCCCAAACCCGAGTTCAGACTACCTTGCATCTTTGCTGCTCCCTTT
TTGGAATGTATTGGTCTCATTTGGTACGGCTGGAGTGCTGAGAGTCACGTCCATTGGATC
ATGCCCATCATTGGAACCGGTATTTTCTCTTTTGCAGTCATGGACGTGTTCCAGACAATC
CAGACGTACTTGATTGACATGAACCCGCGGTTCTCAGCCTCGTATGTTGCCTCCGCCTCG
CTGTTCAGATCGTTGTTTGGTTTCGCCATGCCCCTGTTTGGCAGACAAATGTACGACGCC
ATGGGATACGGCTGGGCCAACACAATGTGCGGCATTCTGGCGGTGGTGCTGGGTCTGCCT
TTCCCCATCATTGTGTGGTTTTACGGAGAACGGATCCGAAACCGCTTCGATAAGAAACTG
GAAGCCTCGCAGGCCAAGAAGGACGAAAAGAACATGGAGAAGATGCGAAAGCGAGAACTG
GAACGGGAGCTCAAGGAACAGGAGAAGCTGGATAAGGAGAAGAATGAACACGTGCATTTT
GTTGCCGTGGAAACATCTCCTTCCATCAAAAATGAAGACTCCCTCTAACTCTAGCATTAT
TGAATATTTAATAACTGTGCATACTAATACATTTGAATAACGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E21241g_CDS-001

Protein length: 636 aa.
Product: Conserved hypothetical protein

>YALI0E21241g_CDS-001 MSIHSSSSHDKDIVQIVEDSIGLSKTDTRSSHVSRASKASRAASDYQIDHIYGDMDRREI
TLARQITRETILSAYQEKVRSRASSIINGKIDPSTAPPPPLKNGGDGSQFLDVDPELVTW
DGDEDPENPQNWHTYKKVATTVIVSLYTFVSPLTSSIISPAVPAIAAEYNETRPVVQSLM
VSIMILAWAICPLFVAPLSEMYGRKIVMDVSILVLLAFTLGCGGAQNTAQMAVCRFFAGV
GGAAPLSVGAGVLADLYSPQKRGTALAWYAIGPTVGPVVAPIAAGWIVQETNTWRWVMWV
DGIFIGCVAACGFLFYSETYPPVLLQRKAKKLRKESGNDALHTIYDIASEPLSSKLYTSM
TRPLRILVTHPIVMGLGLFMAFTYGFMYIMIVTFPALWTERYGFSLGIMGLTFLGMGIGF
LAGTWFWCVYTQKVYIKLRDQNGGVPKPEFRLPCIFAAPFLECIGLIWYGWSAESHVHWI
MPIIGTGIFSFAVMDVFQTIQTYLIDMNPRFSASYVASASLFRSLFGFAMPLFGRQMYDA
MGYGWANTMCGILAVVLGLPFPIIVWFYGERIRNRFDKKLEASQAKKDEKNMEKMRKREL
ERELKEQEKLDKEKNEHVHFVAVETSPSIKNEDSL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG