YALI0E20999g

Overview

Description similar to uniprot|S3CA72 Ophiostoma piceae F503_07508 Flavin-binding monooxygenase
Locus type CDS
Locus tag YALI0E20999g

Location

Species Yarrowia lipolytica Positions 2488977..2490821
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1845 (nuc.)
Previous locus YALI0E20977g Next locus YALI0E21021g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E20999g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E20999gYALI0E20999g_mRNA-001YALI0E20999g_CDS-001

Nucleotide sequence

 

>YALI0E20999g
ATGTCGAGCAAAAACGGAACTGGACACACTGACACTTCTGGGGTGGACAAGGAGGAGCTC
ATCTCCCGATTTGAGCACCTCAACAACCTCGAGCCTTCTGAATGGGCCGAAAAGATTCTT
TCTCGTCCACCTCTGGGTCGAGACGCCGTCAAAGTCGTGATATCTGGAGCTGGACTCGCA
GGTATCACCACTGGCATCATTCTGTCCAACAAAGTTGACAACATTGATCTGACGATTCTG
GAGCGAAGCCCCGAGTCTGGCGGTGTTTGGTTCGACAATCATTATCCAGGCGTCGCCTGC
GATGTCCCTTCTCACGCGTACCAGCTTTCGTTTGACCCCAAGAAGGACTGGAATCGGGCC
TACGCCAAAGGACCCGACATCAAACGGTACTGGCAATCTCGAGCCAAGAAGTACGGTCTG
GAGAACAAGATCAAGTTCCGCCACAACATTGACGAGGCCAAATGGGACGAAAAGACTCAT
CAGTGGGTTCTCCAGGTGGAAGAACTGGAAGCCAGGAAGAAGAGTGAGATTCGAACAGAC
ATCTTCATCTCGTCTTCGGGTTCCCTTAACAACCCCCGATACCCTCCCCACCAGCCGGGC
TTTGACTCGTTCCAGGGAATCAAGTTCCATCCTCAGAAGTGGCCTGAAGGGCTAGACTTG
ACTGGTAAACGGGTTGCACTGATTGGAAATGGAGCTACTGGAGTCCAGATCCTTCCTCAG
ATTGCCGAGAAGGCTGCTCATGTCGACCACTACGCCAAGTCCGCCACCTGGATTGGACAC
ACTCTGTATGGCAAGGGCGTGCCTGGATACGTGGATTACACCGATGAAGAAATTAAGGCG
ATCGAGACAGACGAGGAATACCACAAGTTTCGAAAGGCTCTCCATACCGAGATTGGAGGC
AAGTACAATTACTTCTTCTACGGAACTCCAGCCTTCAGAGAGGGTATCAAAGAGCTCCTT
GCTATTGCGTGGCTGCGAGTTGGTAAAGATCCCGAGCTGTTCAAGAAGGTCATTCCCCTC
TACACCCCGGGTCCGAGACGTCTTCTGCCTGCTCCTGGCTATCTGGAGGCTCTGACAAGA
TCCAATGTTGACTATCATCTGGGAGAGGTCAAGGAGTTCACCAAGGACGGAGTGATTGGC
TTTGATGGCGTTGAACGGAAGGTAGACGTTGTCATTGCTGCCACTGGATACATCAAGTCC
AATGGACAGGGATTCACCCCCAACTTTGACATCATTGGTCAAGACGGATACACTCTGAGA
GAACACTTTTCTCCTCTCGAGTCCAAGCTGGGTTACTCGGCCTCATACCTTGGTCTATCT
GCTCCAGGCTTCCCCAATTTCTTCTACACGCTCTCTGTCAACTCGTACATTCCCGAGACT
ACTGCTCCTGTGACCGCCGAAGTCCAGGCCTCGTACATTGCTCGAGTGATTCGAAAGAAG
CAGCTTGAGAAGATCTTGTCCATCGTGCCGTCTCTGGAAGCTACCAAGGCGTTCAATCGA
CGTCTTGCCGAGCTGTCCGAAGCCGTCTCTCTTACCAAGGGAACAGGTATTTACAGCGAG
AGAACTCGAGATGGAGACAGTCGATTGAAGATTGCCTGGCCCGGATCTGTGTCTCATGCT
GTGGCTGTTCTGCGTGAGCCTCGCTGGGAAGACTACGACTATGAGTACGAGGACAATGAT
GATCCGTTTGCGTACTTTGGGTCTGGCAAGACCTGGATTGATGATCACGAGGGCGACAGG
ACGTTTTACTTGTCTGAGCCGGGCTCAATCACTGCCCGTAATCTCCACGAGGGTTGGATT
TCCGTACCCTCAGACGGTCCTCCCAGTGCCCCTCATTCAAAGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E20999g_CDS-001

Protein length: 615 aa.
Product: Flavin-binding monooxygenase, putative

>YALI0E20999g_CDS-001 MSSKNGTGHTDTSGVDKEELISRFEHLNNLEPSEWAEKILSRPPLGRDAVKVVISGAGLA
GITTGIILSNKVDNIDLTILERSPESGGVWFDNHYPGVACDVPSHAYQLSFDPKKDWNRA
YAKGPDIKRYWQSRAKKYGLENKIKFRHNIDEAKWDEKTHQWVLQVEELEARKKSEIRTD
IFISSSGSLNNPRYPPHQPGFDSFQGIKFHPQKWPEGLDLTGKRVALIGNGATGVQILPQ
IAEKAAHVDHYAKSATWIGHTLYGKGVPGYVDYTDEEIKAIETDEEYHKFRKALHTEIGG
KYNYFFYGTPAFREGIKELLAIAWLRVGKDPELFKKVIPLYTPGPRRLLPAPGYLEALTR
SNVDYHLGEVKEFTKDGVIGFDGVERKVDVVIAATGYIKSNGQGFTPNFDIIGQDGYTLR
EHFSPLESKLGYSASYLGLSAPGFPNFFYTLSVNSYIPETTAPVTAEVQASYIARVIRKK
QLEKILSIVPSLEATKAFNRRLAELSEAVSLTKGTGIYSERTRDGDSRLKIAWPGSVSHA
VAVLREPRWEDYDYEYEDNDDPFAYFGSGKTWIDDHEGDRTFYLSEPGSITARNLHEGWI
SVPSDGPPSAPHSK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG