YALI0E20757g

Overview

Description some similarities with uniprot|O13547 Saccharomyces cerevisiae YLR390w-a SSR1 Secretory Stress Response protein 1
Locus type CDS
Locus tag YALI0E20757g

Location

Species Yarrowia lipolytica Positions 2458443..2459464
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1022 (nuc.)
Previous locus YALI0E20735g Next locus YALI0E20779g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E20757g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E20757gYALI0E20757g_mRNA-001YALI0E20757g_CDS-001

Nucleotide sequence

 

>YALI0E20757g
ACAACAACACCGCACTAATACCCACACTCGTTATTTATATTTCTTCAAACACAAATACCC
CCACCAACACAAAATGAAGTTCTCCGTCGTCGCCCTCGCTGCTGCCGCCTCTGTGGCCTT
TGCTGCTCCCCCCGCCTGTCTCCTGGCCTGTGTGTCCGAGGTGACCAAGAACTCCGAGTG
TGATGCTCTCAACAAGGTCGGCTGCATCTGCTCCAAGCTCGGCGAGTCCGTCAACGACTG
CCTCGAGAAGAAGTGCCCCAACGGCGACGCCGACAAGGCCAAGCAGGCCTTCGAGTCCTC
TTGTAAGGAGCAGGGTGCCTCTGTCGGAGGCTCCAAGCAGTCTTCTTCTTCTGCTGCCTC
CTCCTCCACCAAGGCTTCCTCTTCCGCCGCTTCCTCTTCTGCCGCTGCCTCCTCTTCTGC
TGAGGCTTCCTCCTCTGCTGAGGCCTCCTCTTCCGCCGAGGAGAAGTCCTCCGCTACTGG
AGCTGCTTCTTCCGCTGAGGCCACCTCCGCCGAGGCTTCCTCTTCCGCCGCCGAGTCCGC
TGAGGCCTCTGGCTCCGCCTCCGACGTTGTCACCAAGACTGGCGCCGTCGTCGTCAACTC
CACCGCCGTCGTCACCATCACCTCTTGTGAGGATGACAAGTGCCACCAGTCCACCGCCGA
GGCCAAGCCCACTCCCTCTTCCGCTGCTGTTGAGTCCAAGCCCGCCGAGTCCAAGCCCGC
CGAGTCCAAGCCCGCCGAGTCCAAGCCCGCCGAGTCCAAGCCCGCCGAGTCCAAGCCCGC
TGAGTCCAAGCCCGCTGAGACTCAGCCCGCTGCCACCACCCCCGCTGCCACTGTTGCTCC
CCAGGCTACCCCCTCTGCCTCCACCCCCATTGAGCAGGCCAACGGAGCTTCTTACAACGG
TGCTGCCGCCGCTCTGGCCGTTGGAGCTGCCTTCGCCGCCGCTCTCATCTAAGGAGACCC
AACAACAGCTCTTGTTTAAGTATATATATAAAAGCATAACCATCTAGATTCTGATTCACT
TT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E20757g_CDS-001

Protein length: 293 aa.
Product: Conserved hypothetical protein

>YALI0E20757g_CDS-001 MKFSVVALAAAASVAFAAPPACLLACVSEVTKNSECDALNKVGCICSKLGESVNDCLEKK
CPNGDADKAKQAFESSCKEQGASVGGSKQSSSSAASSSTKASSSAASSSAAASSSAEASS
SAEASSSAEEKSSATGAASSAEATSAEASSSAAESAEASGSASDVVTKTGAVVVNSTAVV
TITSCEDDKCHQSTAEAKPTPSSAAVESKPAESKPAESKPAESKPAESKPAESKPAESKP
AETQPAATTPAATVAPQATPSASTPIEQANGASYNGAAAALAVGAAFAAALI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG