YALI0E20647g - URC4

Overview

Description uniprot|Q6C566 Yarrowia lipolytica YALI0E20647g URC4 Uracil catabolism protein, putative
Locus type CDS
Gene name URC4
Locus tag YALI0E20647g

Location

Species Yarrowia lipolytica Positions 2443947..2445292
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1346 (nuc.)
Previous locus YALI0E20625g Next locus YALI0E20669g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E20647g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E20647gYALI0E20647g_mRNA-001YALI0E20647g_CDS-001

Nucleotide sequence

 

>YALI0E20647g
ATGGACTACCTACTTACACTACCCTCGGTGAGAGATAGGTCGACAGCCGTGTTCAACCAG
GCCAAGGTCGACAAGCTCACCAACTTCACCGCGGACTTTGAAAAGCTACCTGCCGTGGCA
GAGTACGTCCATAAACTCATTGAACGAGACTACCAGTCGGACGCCTCCAGAATCCCCCCT
CACGGACGATGGCAACACTTTGACGTGGGTCACAAACGCCTGGAGCCCCTCATTGAGTCC
TGGGAGAAAAAAGGAGTCTCCAAGGACGAGGTTGCAGCTAGACTGGTCGATCTGTTTGTG
GTGTCTGTGCTTCTGGATGCCGGAGCAGGGCCCACCTGGAAGTACACAGAAGGCTCCGGA
GAGCAGACAGGGCGATCCGAGGGAATCGCAATTGCCTCCCTCGACATGTTCGCCGCGGGA
ATCTTTGGTGATCCCGATATTGTGACGGGTCCCGGCCTAGAAAGGCTCACCCTCAGCCAG
CTCAGTGATGGCTTCCAAGTAAGCAAGACGAACCCGATGGACGGCCTTGAGGGACGGTAC
AATCTGCTCGTCCGGCTAGGAAAGGCTCTCATCGCTTCTCCTGAGCTCTTTGGACCCTCT
GCTCGCCCAGGTCATCTCATCACTTACCTCAAGAGCACAGAAGAGCCCATCGAGATAGCA
ACTCTCTGGGAGGCGCTGATGAAGGGCCTGGGTCCCATTTGGCCTGCGGGACGACTCAAG
ATAAACGGTAAGGCTCTGGGAGACGCTTGGGTATGTTCCTCTCTCCCCAACCCTTCAGGA
GACGAAGCTGGATCTGTCACGCCTTTCCACAAACTCACCCAGTGGCTGACGTACTCCATT
CTGGTCCCCATGAAGGAGTATGGAGGCCTCAAGTTTGTGGGAGAAGAGCAACTTACTGGT
CTACCCGAGTACCGAAACGGAGGTCTTCTGGTCGATTTCGGGGTTCTGACTCTCAAGCCT
GAGGCACTGAAACAATCGCTTAGTGGTGCCAATGACCTTCCCAAGTTTGAGCCCTCCTCT
GACGTGATTGTCGAGTGGAGAGCTCTTACCGTTGGCTTCCTGGATGCCCTTCTTCCCATG
GTCAATGCTATGCTGGAAACGCCTCTTGTGTTGCCCCAACTTTTGGAGGCTGGCACTTGG
AAGGCTGGTCGTGAAATTGCCAAGGAAAAGCGATCCAACGGCGGGCCTCCTATTGAGATT
CAGAGCGATGGCACTGTGTTCTAATCCTCGAGAAGTCGTATAACCCTTAGGGTCCCTACC
ATTTCTACTCCATCAACTTGCATCCTTCATGTAACTCACTGTTAACCGATCTATGTTATT
AATATACATTATATGCACCCATACCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E20647g_CDS-001

Protein length: 408 aa.
Product: Uracil catabolism protein, putative
Gene: URC4

>YALI0E20647g_CDS-001 MDYLLTLPSVRDRSTAVFNQAKVDKLTNFTADFEKLPAVAEYVHKLIERDYQSDASRIPP
HGRWQHFDVGHKRLEPLIESWEKKGVSKDEVAARLVDLFVVSVLLDAGAGPTWKYTEGSG
EQTGRSEGIAIASLDMFAAGIFGDPDIVTGPGLERLTLSQLSDGFQVSKTNPMDGLEGRY
NLLVRLGKALIASPELFGPSARPGHLITYLKSTEEPIEIATLWEALMKGLGPIWPAGRLK
INGKALGDAWVCSSLPNPSGDEAGSVTPFHKLTQWLTYSILVPMKEYGGLKFVGEEQLTG
LPEYRNGGLLVDFGVLTLKPEALKQSLSGANDLPKFEPSSDVIVEWRALTVGFLDALLPM
VNAMLETPLVLPQLLEAGTWKAGREIAKEKRSNGGPPIEIQSDGTVF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG