YALI0E20537g

Overview

Description similar to uniprot|P35817 Saccharomyces cerevisiae YLR399C (ohnolog of YDL070W) BDF1 sporulation protein
Locus type CDS
Locus tag YALI0E20537g

Location

Species Yarrowia lipolytica Positions 2433768..2436399
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2632 (nuc.)
Previous locus YALI0E20526r Next locus YALI0E20559g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E20537g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E20537gYALI0E20537g_mRNA-001YALI0E20537g_CDS-001

Nucleotide sequence

 

>YALI0E20537g
AAACACTGACTCTCATTGGTCAGTTTGGTGGGTACAAAGAACAAAGAGTGAGTACAGACA
AAGAAATCCTATTGCGTTGGTATGCACACGACATGCGCTTGATGGTGATGTCGTGTGTTA
TGTGTGATGGTGATGTCGCTGATGCAGGACCTGACGATGGTGTTGTTATTGCTGGTGCAT
GAAGGCGTTGCTGTTGATGTTTATGATGGTGATGATGATGGAGGTGGTAGTGGTGATGAA
GGTGATGGATGTGATGAATGTGATGAAAGCAATCTATCTATGACGGTGTCGTCGTTGTAG
ATGTGTCGTATCCACGTCACTGCAACCCCACAGCTGTGTTCTCTGTTGCAGCGCCTAGCT
CGCACCCTTCGTTCTACTCGTCACTTGCATCAAGTTTACGGTTCATGTCGCCACCCATAC
ACATCGTCACTATTACTAAGGTGCAGTCGTTGTCATATGACCAGATGATACGCCACCGGA
TATGATGGTGATGTTTCTACTTAAATGCACTTGCGGCCCCACCCTCTATTGAACTGTTAC
TAACCAGAGATAGATATATTTTAATTAATATATCTACTGTACATATGACTACTATGGAGA
CGACCCCCACAGTCAACGCTTCAGATGTGGACGTGAAGCGACCCGGCGACGACGTGGAGA
AGGACGACATCAAGCGTCCTCGTGTGGAGGACACCGACGCCATGGACACAGAGGAGCCAA
AACCCACTGACTCCAAGGACGCCACCGAGTCCAAGCCCGACGAGGCGCCCAAGTCAGACG
AGTCGGAGGTTAAGGATTCTGATGACAAGCCTACCGAAGAGACCAAGCCTGAGGTCAAGA
CGGAAGATACCAAGGGGCAGCAGGACGAATCCGCTCACTCTGAGGCAGCCTCTCTGCCCA
CTCCTTCCTCCTCCATTGTCGAGTCCGACAAACCTGTGGTGGAAATGCCAAAGCACCAAG
TCAAGTATGCGGCATCATCTCTCAAGGCCGTGAAGCGGCTCAAGGATGCCGCACCGTTCA
TCCACCCCGTGGACCCCGTCAAGCTCAACATCCCAACATACTTTGAGGTAATCAAGCATC
CCATGGATCTTGGCACCATGGAGAAGAAGCTCAACAACGGCGAGTACGGCACGAAAGAAG
ATATGATTGCCGACGTTCAGCGGATTGTCGACAACTGCCTGACTTTCAATGGCGCCGATT
CTTTCATTTCCAGCATGGCCAAGTCACTCTTCACATCGTTTGAACGTCACATGTTCAACT
TCCCCAGTGCCGACGCCCCAACAGAGCCCCAAAAGAAGAAGAAGTCTTTGGGTGGCGGTT
CCAGCACCCGGACTCCTCGAGGATCTATGACTGCTGGCAGTGAAGAGACCTACGCACTAC
AACCCAGTGGCGTCCCCACTATTCGACGGGAGTCTGCTATCGACGGGCGACCGAAGCGGG
AAATTCATCCCCCGAAGCCAAAAGACCTCCCTTACACCAATATTAAGCCCCGCAAGAAGA
AGCACGCTATTGAGCTCCGATTCTGCAACCAGGTGCTTAAGGAACTAACCAGCAAAAAAC
ATGAGGAGTACTCGTTCCCCTTCCTTCTCCCAGTGGACCCCGTGGCTCTCAACTGCCCCT
CGTACTTCAAGATCATCAAGGAGCCCATGGACCTGTCCACTGTGCAGGAAAAGATGAACA
ACAACGCCTACGAGACTGCGGACGAGTTTGAGAGCGACGTGCGCCTCATTTTCAAGAACT
GTTACCGGTTCAACCCTGATGGCACTCCCGTCAACAAGATGGGCAAGAGACTCGAAGCCA
TCTTCGACAAAAAGTGGGCTGAGAAGCCCATCCCCCCTCCTTCTCCTCCCCCAACGATGG
ACGACTCCTCTGACTACGACGAGTACTCTTCGGATGAGGACCTCGCCTCTTCTATCACTA
ACCCTGCCATTGCATTTTTGGAAGAGCAGATTGAGAGAATGAAGCAGGAACTCACCAAGA
TGAAGAAGGACGCTGCTCGAGAGATGAAGCGGTCTCGACGGCGAGGCTCGTCCAAGCGAT
CGAAGTCCAGTTCTAAGCGAAAGGGTTCGCGGTCGTCCGATTCCGGCGGAGTGGTTGTCT
CCTACGAGATGAAGAAGGAACTCAGTGAGCGAATTCCCCAGCTCAAGGAGAAGCAGCTTC
AGCATGTCATCAATCTCATTCACGAGTCGATGCCCCAGCTTAAGAGTGAGGGTCAGGATG
AGATTGAGCTGGACATGGACCAGCTCGACCCCCACACGCTGATGAAGCTGTACAACTATG
TTGTCAAGGACGACAGCAAGAAGAAATCATCTTCAGGAGGCAAGAGTACGTCTTCCTCCC
GACCTTCTTCTTCTGTCTATCCTGGTCAGCGGAAAAAGTCCAAGCCCATGTCTGAGAGTG
AGCAGGCACAGCAGATTGAGCAGATTCAGAAGAAGCTGCGACAGTTTGATGAGGCTGAGG
GCGGTTCTGCTACCCCTCCTCCCACCAACGGCCACTTTGATGATTCGTCTGACGATGACA
GTGGTTCCAGTAGTGAAGAGGAGTAAGTGGAGTAGCAGACAGGTTATTTATTTTAATGTG
TCATGATGTATATTAGTGATAGAAGTTAACTGACTTAATTATTTTATGTGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E20537g_CDS-001

Protein length: 654 aa.
Product: Protein involved in transcription initiation, putative

>YALI0E20537g_CDS-001 MTTMETTPTVNASDVDVKRPGDDVEKDDIKRPRVEDTDAMDTEEPKPTDSKDATESKPDE
APKSDESEVKDSDDKPTEETKPEVKTEDTKGQQDESAHSEAASLPTPSSSIVESDKPVVE
MPKHQVKYAASSLKAVKRLKDAAPFIHPVDPVKLNIPTYFEVIKHPMDLGTMEKKLNNGE
YGTKEDMIADVQRIVDNCLTFNGADSFISSMAKSLFTSFERHMFNFPSADAPTEPQKKKK
SLGGGSSTRTPRGSMTAGSEETYALQPSGVPTIRRESAIDGRPKREIHPPKPKDLPYTNI
KPRKKKHAIELRFCNQVLKELTSKKHEEYSFPFLLPVDPVALNCPSYFKIIKEPMDLSTV
QEKMNNNAYETADEFESDVRLIFKNCYRFNPDGTPVNKMGKRLEAIFDKKWAEKPIPPPS
PPPTMDDSSDYDEYSSDEDLASSITNPAIAFLEEQIERMKQELTKMKKDAAREMKRSRRR
GSSKRSKSSSKRKGSRSSDSGGVVVSYEMKKELSERIPQLKEKQLQHVINLIHESMPQLK
SEGQDEIELDMDQLDPHTLMKLYNYVVKDDSKKKSSSGGKSTSSSRPSSSVYPGQRKKSK
PMSESEQAQQIEQIQKKLRQFDEAEGGSATPPPTNGHFDDSSDDDSGSSSEEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG