YALI0E20295g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E20295g

Location

Species Yarrowia lipolytica Positions 2407402..2408055
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 654 (nuc.)
Previous locus YALI0E20273g Next locus YALI0E20317r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E20295g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E20295gYALI0E20295g_mRNA-001YALI0E20295g_CDS-001

Nucleotide sequence

 

>YALI0E20295g
ATGTCTATCGATGAGTCGTTACAGATCATCGAGGCGCGCATTCGTGACGCGGAGTTTCTG
ACCCAGAAAGCTCCTGCTCTGGCTCGAGAGGAGAACCAATTTGAACTGGACACGGAGGAT
GAGCTGTTCAACGAGCTCATGAGAAGCGACCAGGTGGTGGACGACACCTTTGTCAACGTC
GACGGGCTGTCGCTGGAGAAACAGCTTTCATTGGTGGAGGGAAAGTTCCAGCAACTGATC
AAGGAGAACAAGGTGTTCCGAGACTACCTGACGTCCATAGAGCCCTACAAGCAGGACCTG
GGTCTCATGAAGGCTGCACAGGCCAATGGTAGACCTTCACCAGAAGCTAAAGTGGTGGTT
GATGCACTTGACCCAGACACTTTGTTGTCTTTCACTCATGCTCATGGGGTGGACGAGATC
AAGAGTGTCGGAGAACTGGTTCCTGAGAGCGCTTCCAAGGTGCTGAGTGAATATTCAGAA
ATGGCTCTGACGGAGGACCATCTGGAGAGACTTAGCAACGACGTGGCCATACTAGCTGTG
AGATCCGCCCGGGTGCTGGAGAAGTACGTGTCGGAAATGGTGATTGAGCCGAATGAGAGA
CTAGGGGAGTTGGACGAGAAGCGGAGAACTGAGGCAGCCAAAGCAAAGGATTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E20295g_CDS-001

Protein length: 218 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E20295g_CDS-001 MSIDESLQIIEARIRDAEFLTQKAPALAREENQFELDTEDELFNELMRSDQVVDDTFVNV
DGLSLEKQLSLVEGKFQQLIKENKVFRDYLTSIEPYKQDLGLMKAAQANGRPSPEAKVVV
DALDPDTLLSFTHAHGVDEIKSVGELVPESASKVLSEYSEMALTEDHLERLSNDVAILAV
RSARVLEKYVSEMVIEPNERLGELDEKRRTEAAKAKD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG