YALI0E20229g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E20229g

Location

Species Yarrowia lipolytica Positions 2400449..2401810
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1362 (nuc.)
Previous locus YALI0E20207g Next locus YALI0E20251g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E20229g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E20229gYALI0E20229g_mRNA-001YALI0E20229g_CDS-001

Nucleotide sequence

 

>YALI0E20229g
ATGCTTCCCTTCGTTTTGTCTGTGCCTCTCATGGCCTCTCTGGCTGCTGCCCAGATCTTT
CCCAACTCGACCCTGGCTTCAATCTCCTCTACCTCCACGGCTGCTGTGACCCTTCTCCCT
GAGGCCAATGCTGCTGTTACAAGTGGCGTCTCTGAATCCGCTGGCGAAGAGGTCACTACC
GAGGTGGTCACGGTGGTCGAGAGCAACTCCACATCTACCATGACTTTGACCAAGACCCAT
TGTCCTGCCTGTACCGAGACTTCCTCCCCTGACGTCTCTTACACCACCTACACCACCATC
TACACAACTTCTGGAGTAGTCGTCACCAAGACTGTCACTGAAGAGTGTGTCACCCCTACC
CCTACTTACACCACTTACACTACTGTCTACACTACATCAGGCATAGTTGTTACAGAGACT
ATCATCGAGGAGTGTTCTACCGAGAGTGTCGTTCCTACCCCTGCTCCTGTTTCCTCTTTT
GACCCTTCCGTCTCCCTCACCACTTATGCCACTGTCTACACGACCGATGGAGTAGTTACT
ACTATCACCGTCACGGAAGAGTGTAGTACTGAGGCTGGACCTACTGAGACTCCAGCCCCT
GCTCTTGAACCTACCCCCGAGACCCCTGCCGTTCCTGTGGTTTCTTCCGCCGTAACCCCC
TCTGAAGAAGCCACCGTCTTGACCTACACTGTTGGAACCATCACATACACGTCCGTTGTT
ACTTGCACCGAAAAAAAGTGCCACCCCACCCCTGCGGTTGTCACTTCTGAAGTCCCCAAG
GTCTCTAGCATCCCCGAGCAGCCCCAGCCTAAGCCCGAGGGGCCCACTCTCTCCACTGTC
ACCTACACCAAGGGCACTATCACTTTTACCACTGTCCAGATTTGTACTTCCGGTGCTTGT
GAAGTCCCCAAGACTCCTGTTGCCGTTCCCGAGACTCCCAGCGCTCCTGTTGCCGTTCCC
GAGACCCCCAACACCCCGGTGGTTATTGACACCACTGTCACTGCTCCTAGCCTCACCCCC
ACAGTCCCCATTGTGGCTGCTCCTCCTATCGAGCCTACAGTTGTTTCTCCTCCTGTTAAA
GTGTCTCCTCCTGTCGAGGTGTCTCCTCCTGTCGAGGTGTCTCCTCCTCCTGTCGAGGTC
TCTGCTCCTCCCCAGGCCCCTCCTACTCCTGCTCCTGCTCCTCCTGCTGACTCTGGACTT
CCCCCTCCCCCTAACACCCCTATTATTCCAGTTCCCGCGGTTTCCACCCCTCCCAAGAGC
ACTACCATTCCCAGTCCTCCTCCCCAGAACACCAGCGGTGGCAACAAGCTGGCCATCAGC
GCACTCATGGGTCTGGCTATTGTCATCCCCCTTGTTATCTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E20229g_CDS-001

Protein length: 454 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E20229g_CDS-001 MLPFVLSVPLMASLAAAQIFPNSTLASISSTSTAAVTLLPEANAAVTSGVSESAGEEVTT
EVVTVVESNSTSTMTLTKTHCPACTETSSPDVSYTTYTTIYTTSGVVVTKTVTEECVTPT
PTYTTYTTVYTTSGIVVTETIIEECSTESVVPTPAPVSSFDPSVSLTTYATVYTTDGVVT
TITVTEECSTEAGPTETPAPALEPTPETPAVPVVSSAVTPSEEATVLTYTVGTITYTSVV
TCTEKKCHPTPAVVTSEVPKVSSIPEQPQPKPEGPTLSTVTYTKGTITFTTVQICTSGAC
EVPKTPVAVPETPSAPVAVPETPNTPVVIDTTVTAPSLTPTVPIVAAPPIEPTVVSPPVK
VSPPVEVSPPVEVSPPPVEVSAPPQAPPTPAPAPPADSGLPPPPNTPIIPVPAVSTPPKS
TTIPSPPPQNTSGGNKLAISALMGLAIVIPLVI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG