YALI0E19052g

Overview

Description weakly similar to uniprot|L8FPU5 Pseudogymnoascus destructans GMDG_05845 hypothetical protein
Locus type CDS
Locus tag YALI0E19052g

Location

Species Yarrowia lipolytica Positions 2273205..2274083
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 879 (nuc.)
Previous locus YALI0E19030g Next locus YALI0E19074g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E19052g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E19052gYALI0E19052g_mRNA-001YALI0E19052g_CDS-001

Nucleotide sequence

 

>YALI0E19052g
ATGCACCACGTGGGAGACCTCCTTGGTCAGAACATCACCAGAATTTCGACCGTGCCAACT
ACCAGCCAGCACATGGAATACAGCACCATCGACCACGATCTCACGCGGGAGGACTACGTG
GCGCTCGCAGAACACCAGTCGTCCACCCCGGCGTCTTTCTCGCTGGAAGACAATGTCGTC
TGCTACTTTGAAGGAACTGTCAATGTCCAACTGCTATCAGAAGATGGAAAGGGAGACCAG
ACGGCGTACCAGCAGGGAAAGATCTACGTGCTGACCAGTCATGTGACTCTGTGGTTCGCG
CAGACCTCTTCGGGTGTCAACATTCCGTACCAGAAAATTTTACTCCATGCCACACAACAG
GGATCTGACGGCCACCAGCAGATCTATCTACAGCTCGAAGACTCGCCATTGAGTTTAGTC
GGTCCTTTTGCGGGCGAAAGCCAGGAGTCGTTCAGCGAGGTGATTATCTCCACTCAACCG
GACACTCTGATTGACACTCTGTTTGCTTCTCTTTCTACCTGTGCAGCTCTCCATCCAGAT
CCTTCAGACTCTGATAACGACATGGGACAGCTTCAACCTGCCCTGGAGACGCACGCGGAG
GAGATGGAGCCCGATGGAGACTTGGGCGAGGAGGGGGTGGGAGGCTGGATTGCCCATGAA
AAGATCCAGACCGATTCAATGGACAATGCGTCTTTGGAGGTGATTCTAGAAAACGAGGTA
CGTGCCGGCATTGTCCGACCCCGAGAGGGCTCCGAGGAGCTGGCCGAAAAGTGGAGGAAG
GTGGAGTGATGGGTATCAGGAATGCCTCGGAAATCAACTACTAACTGTACTATACCTTTC
AACAGGGAATTAATAGAATTAGACACATTTGGAGTGGGG

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0E19052g_CDS-001

Protein length: 263 aa.
Product: Conserved hypothetical protein

>YALI0E19052g_CDS-001 MHHVGDLLGQNITRISTVPTTSQHMEYSTIDHDLTREDYVALAEHQSSTPASFSLEDNVV
CYFEGTVNVQLLSEDGKGDQTAYQQGKIYVLTSHVTLWFAQTSSGVNIPYQKILLHATQQ
GSDGHQQIYLQLEDSPLSLVGPFAGESQESFSEVIISTQPDTLIDTLFASLSTCAALHPD
PSDSDNDMGQLQPALETHAEEMEPDGDLGEEGVGGWIAHEKIQTDSMDNASLEVILENEV
RAGIVRPREGSEELAEKWRKVE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG