YALI0E17809g

Overview

Description weakly similar to uniprot|Q9US54 Schizosaccharomyces pombe Putative transcription initiation factor tfIID subunit
Locus type CDS
Locus tag YALI0E17809g

Location

Species Yarrowia lipolytica Positions 2102764..2103384
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 621 (nuc.)
Previous locus YALI0E17787g Next locus YALI0E17831g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E17809g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E17809gYALI0E17809g_mRNA-001YALI0E17809g_CDS-001

Nucleotide sequence

 

>YALI0E17809g
ATGACCGTGCATGCACATCTCCTAGTGAGCCATCGGTCATCTACAACACACACCATGGCG
AAGAAAAAGAAGTTGGACGACGGAAAAGCCCAGGAAATGCCCGAGTCGGGAGATGAAAAC
GAAGAGGAAGATGAGGACGACGGCCAGGGACTTACGTCGTTACTGGGCAACAACGCCAGT
GGAGAAATGACCAACCAGGAAATGGAGGCCGAAAAGCTGCGGATTCTCATGAAGAACTTC
GACACCGAGCAGATGAACCGATACGAGGTCTTTCGACGAGCTAACATCAACCGGCCCGGT
GTGAAAAAGCTCGCCAACGCTGTTCTCAACCAGAGTATCACCGCCAACGTCGCGGTGGTA
CTGTCAGGTATCTCCAAGGTGTTTATTGGAGAGATCATCGAGAAGGCCAAGGACGTGCAA
CTGCGGATGAACCCGCGATATGAGGGAGACGACACTTACGAAAACGCGTCGCCTCTGTTG
CCAGAACATGTGCGGGAGGCCTGGAGAATGTACAAGTTGGAAAGTGGACAGGTTCCCAAT
GCTCATTGGAGACGACAGGGAGGAGGAGGAGATGGACGCATGTTTAGATAGTATTTATTA
GTAATGAAACAATGACTTAGA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0E17809g_CDS-001

Protein length: 197 aa.
Product: Conserved hypothetical protein

>YALI0E17809g_CDS-001 MTVHAHLLVSHRSSTTHTMAKKKKLDDGKAQEMPESGDENEEEDEDDGQGLTSLLGNNAS
GEMTNQEMEAEKLRILMKNFDTEQMNRYEVFRRANINRPGVKKLANAVLNQSITANVAVV
LSGISKVFIGEIIEKAKDVQLRMNPRYEGDDTYENASPLLPEHVREAWRMYKLESGQVPN
AHWRRQGGGGDGRMFR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG