YALI0E17545g - BIO6

Overview

Description uniprot|Q6C5J6 Yarrowia lipolytica YALI0E17545g BIO6 8-amino-7-oxononanoate synthase/7-keto 8-amino pelargonic acid synthetase
Locus type CDS
Gene name BIO6
Locus tag YALI0E17545g

Location

Species Yarrowia lipolytica Positions 2064661..2065892
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1232 (nuc.)
Previous locus YALI0E17501r Next locus YALI0E17567g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E17545g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E17545gYALI0E17545g_mRNA-001YALI0E17545g_CDS-001

Nucleotide sequence

 

>YALI0E17545g
ATGCTCAAGCAACTGGAAAATATTCTTGAGTCGCGAAAGCACAAAAACAGGTTCCGAAAA
TTGACGGTCATGGATCCTGAGTCGACGGTGGATTTTTCTTCGAACGATTTTCTGTCGCTC
GGAAAGTATCAACCATTCAAAGACAGCGTCAGTGTCAAGGTGGCGGATTTCTGCGCCCAA
ACCAGCTCTTCTCTGGGTTCTGGAGGGTCTCGACTTTTGGATGGAAATTGTGCACTGTAC
GAGGGTCTTGAACGTCAGATTGCAGCATTCCATGGAGCAAAGTCTGGCTTGATTTTCAAT
TCTGGATTCGACGCCAACTCGGGGTTTTTCTCCTGTCTTCCTCAGCCTCAGGATATAGTC
ATTTACGACGAGTTGATCCATGCCAGTGTTCATGAAGGAATGCGTCAATGTCGGGCAAAG
AAACGGGTTCTTTTCAAGCACAATGACGTGGAGGACTTTGAGCGGGTTTTGAACCAGTAC
AAGGGCGAATCAGGCAACATTTTTGTGGCCGTAGAGGCTGTATACAGCATGGATGGTGAT
ACAGCTCCGTTGAGACAACTGTACGACGTTTCAGACCGTCTGAACAGAGAGATTCTTTTG
GTGGTGGACGAAGCTCATGCCACAGGTGTACTTGGAGACCAGGGACGAGGTCTGGTGTGT
GCTCTCGGTATGGAGAAACAGGTATTTGCTCGAATCCATACGTTTGGAAAAGCTCTGAGT
GCCAATGGAGCCATTATTTTATGTCATCCCGTGGTTCGATCTTATCTGATCAACTATGCT
CGTTCTTTTATCTTTACAACTGCTCTTGGTCAGGTGAATCTGCTCATCATTCAGGCCACC
TATGAGCTTCTGGAAACCCAGGCAGCAGCACATCTTCAGACTCAACTATGGGACAATCTG
CAGCGGTTTTCCACGGGGTTGAAGGACACTGGAGTTCACGTTTATCCTCCTGTGCCCCGG
TCGGCCATCTTTTCAGTCTTCTGCGACAACCCGCGGTCTCTGGCGGCCCACTGTCAGCAG
TCTGGGCTGGTTGTGAGACCCATTGTGCATCCCACGGTTCCCAAGGGAACGGAGAGAGTC
CGGGTGTGCATTCACAGTGCTAATACCGCCAAGGAGGTGGACATGCTAGTGCACAGGATT
CTCGAGTGGCATTCTCAGAAGGAGATGAGAGGGCGGTTGTAGAGGGTACAGACTCTCCTA
GGAGTAGAGGGCAATAGAAATTGAAGATACGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E17545g_CDS-001

Protein length: 394 aa.
Product: 8-amino-7-oxononanoate synthase/7-keto 8-amino pelargonic acid synthetase
Gene: BIO6

>YALI0E17545g_CDS-001 MLKQLENILESRKHKNRFRKLTVMDPESTVDFSSNDFLSLGKYQPFKDSVSVKVADFCAQ
TSSSLGSGGSRLLDGNCALYEGLERQIAAFHGAKSGLIFNSGFDANSGFFSCLPQPQDIV
IYDELIHASVHEGMRQCRAKKRVLFKHNDVEDFERVLNQYKGESGNIFVAVEAVYSMDGD
TAPLRQLYDVSDRLNREILLVVDEAHATGVLGDQGRGLVCALGMEKQVFARIHTFGKALS
ANGAIILCHPVVRSYLINYARSFIFTTALGQVNLLIIQATYELLETQAAAHLQTQLWDNL
QRFSTGLKDTGVHVYPPVPRSAIFSVFCDNPRSLAAHCQQSGLVVRPIVHPTVPKGTERV
RVCIHSANTAKEVDMLVHRILEWHSQKEMRGRL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG