YALI0E17479g

Overview

Description similar to uniprot|P32178 Saccharomyces cerevisiae YPR060c ARO7 chorismate mutase
Locus type CDS
Locus tag YALI0E17479g

Location

Species Yarrowia lipolytica Positions 2062286..2063201
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 916 (nuc.)
Previous locus YALI0E17457g Next locus YALI0E17501r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E17479g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E17479gYALI0E17479g_mRNA-001YALI0E17479g_CDS-001

Nucleotide sequence

 

>YALI0E17479g
ATGGACTTCACTAAAGCCGACACCGTTCTGGATCTCGCCAACATCCGAGACTCGCTGGTC
CGAATGGAGGACACTATTGTCTTCAATCTGATTGAGCGGGCTCAGTTCTGCCGTTCCGAG
TTTGTGTACAAGGCCGGCAACTCGGACATTCCCGGCTTCAAGGGCTCTTACCTCGACTGG
TTTCTGCAGGAGTCGGAAAAGGTGCACGCCAAACTGCGTCGGTACGCTGCCCCGGACGAG
CAGGCCTTCTTCCCCGACGATCTGCCCGAGGCCATTCTGCCCCCCATCGATTATGCGCCA
ATTCTGGCGCCCTACAGCAAGGAGGTGAGCGTCAACGACGAGATTAAAAAGATTTACACC
GACGACATTGTGCCCCTGGTGTGTGCTGGCACTGGAGATCAGCCCGAGAACTATGGGTCG
GTCATGGTGTGCGACATCGAGACGCTGCAGGCGCTGTCGCGACGAATCCACTTTGGCAAG
TTTGTGGCCGAGTCCAAGTTTCTGAGTGAAACCGAGCGATTCACCGAGCTCATCAAGAAC
AAGGACATTGCTGGTATTGAGGCGGCCATCACAAACTCCAAGGTGGAAGAGACGATTCTG
GCCCGGCTGGGAGAAAAGGCACTGGCCTACGGCACAGACCCCACTCTCCGGTGGTCGCAG
AGAACCCAGGGAAAGGTTGATTCCGAGGTTGTCAAGCGAATCTACAAGGAGTGGGTGATT
CCACTCACCAAGAAGGTCGAGGTGGACTACCTGCTCCGGCGGTTGGAGTAGCGTGTGTTT
TTTTAGCGAAGCGAGAGAATACTGACGGGGTATACGGACATGTAGTATTTGAATGTGCAA
TACTACGAGCATGCGGTCTTCGGGTACCCTCGATAAGACGATCGAAATAGTACATTGAAT
GTGAAAAACGGTATGG

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0E17479g_CDS-001

Protein length: 257 aa.
Product: Chorismate mutase, putative

>YALI0E17479g_CDS-001 MDFTKADTVLDLANIRDSLVRMEDTIVFNLIERAQFCRSEFVYKAGNSDIPGFKGSYLDW
FLQESEKVHAKLRRYAAPDEQAFFPDDLPEAILPPIDYAPILAPYSKEVSVNDEIKKIYT
DDIVPLVCAGTGDQPENYGSVMVCDIETLQALSRRIHFGKFVAESKFLSETERFTELIKN
KDIAGIEAAITNSKVEETILARLGEKALAYGTDPTLRWSQRTQGKVDSEVVKRIYKEWVI
PLTKKVEVDYLLRRLE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG