YALI0E17325g

Overview

Description some similarities with uniprot|P38314 Saccharomyces cerevisiae YBR214W (ohnolog of YGL056C) SDS24
Locus type CDS
Locus tag YALI0E17325g

Location

Species Yarrowia lipolytica Positions 2046053..2047693
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1641 (nuc.)
Previous locus YALI0E17303g Next locus YALI0E17347g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E17325g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E17325gYALI0E17325g_mRNA-001YALI0E17325g_CDS-001

Nucleotide sequence

 

>YALI0E17325g
ATGGACAAAGAAAACGCCTCAGTGGAAAAGGCCCCCACCACCCCGTCTTTGGCGGTCCCT
GCTCCTTCCCAGGCTTCCCCCCAATCGCCCCAGGCAGCTCTATCGCCGTCCAACTCGTCC
ATTCAAGCCACCTTTGCCCGCGCACGAAAAGGCAGTCACGCTTCTCAGATGGAACGCCCC
AACAACCGCGACTTTGCCATTCCAGCCTCCCCCACCGTGGGCGAGTCGTCCATTGCAGAG
CTGGTGACGGCACCACCGGCAGTGACGCCCTCCCGGTCCCGATCGTCGTCGGCAGCCTCC
AACAACCAGGCCGCCATGTCGCCTGTGTTCCCGGCTTACGACGACTCCAACGCAAAGCAC
TACCGCCGATGGGAAGACGACCGATTGGATCTCATGGTGCAGCCCGACAAGCTGGTGTTT
GTGGAGGGAGATACGCCCGTGGAAAAGGCGTTCGATAAACTCGTCGAAAACCACTTCACC
TCGTTGCCCGTGCGAACCGCCCCTGAACACAAGTCCGTCTCCCACTCTTTCGACTACGCA
GACCTCAACGCCTACCTGCTGCTGGTCATGGGCTACGTGGACGCCGCAGACACCACTCCC
GAGGCACTGGAAAACGTCAAGAAGGCGCGATCGGGCCAGCCCGTGCCGGTCAACTTTGTG
GCTGGCCTGGGAGCCAAGGATCCCTTCATCTGTGTGCCTAGAGACTCCACTCTGGCCACT
GCCGTAGAGATTCTCGGCTCTGGCGTCCACAGATTTGCCGTCACTGAGGGCCCCGCCTCC
GACGCTGTCATTGGCATTCTGTCCCAGCGACGAACCGTGCGATACATCTGGGAGAACGGC
CGGTTGTTCAAGACGCTGGAGCCCCTCTTCCAGACGCCCCTCACAGACCTGGGTCTTGCC
CAGCCCAACCCCAATGTGCTCACCATTGGAGGCGATGAGTACGTTATTGCGGCGCTGCGA
AAGATGAACGCCCAGAATGTGTCTTCTCTCGCCGTCGTCGACGCCTCCAACAACCTGTTG
GGTAACATCAGTGTGGTGGACGTGCGGCTTGTGTCCAAGAGCTCGCAGTCACATCTGCTC
AAAGCCACCTGCGCGCACTTCCTGTCAGTCATTCTCAATGCCCGGGGCCTGGAGGACGGC
AAGGACTCCTTCCCCGTGTTCCACGTGACCCCGCAGACGTCATACGGCCGAACCATCGCC
AAAATGGTCGCCACCAACGCCCACAGACTGTGGGTCGTGCAGCCCGATGTGCCCTCTCCA
CAGCCGTCGACCCCCTCTGGTCAGCCGGCCTCCAAGACCCACGGTCCCTCTCACCACGCT
GCTCACAACGGTAAGCTGATTGGAGTGGTGTCGCTGACCGACATTCTCAATGTGCTGGGT
CGACATGCTGGCAACTCGGACCTGGACCCCCATTTTGCCCGTCGAAACCGACGACGGTCT
TCCTCCTCGTCCGTGCGATCGCGATCTTCCTACGAGCAGTTCCGACGGTCCATTTCCATT
GATCGGGGTCAGAGATAGGCCACGGCGGAATCTGGAGTGATCACGTATATAGGTGGAGAA
AAGGGGGGATGGTATAAGAAGGCTCCCTTCTCAAAGAAATCAAGCACTATTTATGCTAAT
AAAATTGAATTATATTTGCTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E17325g_CDS-001

Protein length: 506 aa.
Product: Conserved hypothetical protein

>YALI0E17325g_CDS-001 MDKENASVEKAPTTPSLAVPAPSQASPQSPQAALSPSNSSIQATFARARKGSHASQMERP
NNRDFAIPASPTVGESSIAELVTAPPAVTPSRSRSSSAASNNQAAMSPVFPAYDDSNAKH
YRRWEDDRLDLMVQPDKLVFVEGDTPVEKAFDKLVENHFTSLPVRTAPEHKSVSHSFDYA
DLNAYLLLVMGYVDAADTTPEALENVKKARSGQPVPVNFVAGLGAKDPFICVPRDSTLAT
AVEILGSGVHRFAVTEGPASDAVIGILSQRRTVRYIWENGRLFKTLEPLFQTPLTDLGLA
QPNPNVLTIGGDEYVIAALRKMNAQNVSSLAVVDASNNLLGNISVVDVRLVSKSSQSHLL
KATCAHFLSVILNARGLEDGKDSFPVFHVTPQTSYGRTIAKMVATNAHRLWVVQPDVPSP
QPSTPSGQPASKTHGPSHHAAHNGKLIGVVSLTDILNVLGRHAGNSDLDPHFARRNRRRS
SSSSVRSRSSYEQFRRSISIDRGQR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG