YALI0E17193g

Overview

Description weakly similar to uniprot|Q08204 Saccharomyces cerevisiae YOL034w involved in DNA repair
Locus type CDS
Locus tag YALI0E17193g

Location

Species Yarrowia lipolytica Positions 2034763..2038172
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 3410 (nuc.)
Previous locus YALI0E17171g Next locus YALI0E17215g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E17193g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E17193gYALI0E17193g_mRNA-001YALI0E17193g_CDS-001

Nucleotide sequence

 

>YALI0E17193g
ATGGCCAAACGAGACCTGCCTAACGGCTCGCAGACGGTCGCCAAGCGTCGACGCACGCAG
GACGAACAGATGGGCGTGTTCGACGACGACATTGACGAAGAACAACGGGCGTACAACAAC
GAGATTCGAGAACACGACCAACAACATGGGTCCGAGATGATCCCCCGACCCAGTCTCGAC
ATCTGCGAAAAGACGGGCTACCGACCGGGCAGCATTCTCCAGATTTACATGAAAAACGTC
ATGTCCTACGACGAGTGTCTCGTCAACTTTGGACCCACTCTCAACTTTGTGATTGGCCCT
AATGGATCTGGAAAGAGTACCATGCTCGCAGCCATCTGTCTGGCGTTCGCAGCCCCCATC
ACATGCATGGGCAAGGCGGCCCTTAAGGCCCAGCAGCTCATTAAATCGACCAAGGACGCG
CTGGAGGTGCGGGTCGTGGTCAAGAACTTTGCAGGCATGCCGGACCTCACGTTCAAACGA
ACGCTGACACGTGACGAGAAGCAGGGCAAGTTCTTCATTAACGGCAAGTCGGCTACAATG
AAAGAGGTGCGTGCTACCGCTCGAGAGCTCGACATCCAGATTGTGTCCATGACCCGTTTC
CTGCCCCAGGATCGAGTCAAGGACTTCACCACCATGAGTCCCAAAGAGCTTCTCATAACC
ACCATGGAGGATGTCGGCTACAAAAACATGCGTAGCCACTACGACTCGCTGGTAAACCAG
CAGGAACACAGTGCCGACGACGAGCACAGACTGCAGCTGGCCACAGATGCACTTGCGGAT
CTGGACCGACGAAGAAACGATCTGACTGACAAAATCGCCCAACTGGAGGAGCGTGAGAAG
CAGGAGGAGATGGTTAAGAAGCTGGAAAAGGTGGCTGTTTACAGCAAAGGCATTTTTCTG
AAACAGGAGACTGAGCGTATAAAGCTCGAGGTGGCACAGTTGAATGCCGCCAACAAAGAT
CTGATTGAGGAGAAAGAGACTCTGAGCGAGAAGATGGGCTCGTACCAACAAGTCATTAAG
ACATGCGGAAATGAAATGTCTCAAAAGGAGGAAAAGGCCAAACAGTACTGGCGCAAGTAC
CGAGAGCTCCGTAATAAGGATAAGGAGATTGCGGGCAAGATGGCCAAGCACGAGGGAGAC
TTTGAGGCTGCGCAGCGACGTCTCGACAAGCACGAAGAGGAAACCAAGGTTCTGCAGAAC
AAAGTCCAGGAGGATCAGGCGTCATACACTGCATTGTGCAAGGAGTTGGACGACCCCGCC
TTTCAGGAGAGGAAGGAGGGTCTCAAGGCCAAGCTGGCTGAGTTGGACAAGGACTACAGC
GAGGCTAAACAGGTGATGCGAGACTTGGAAGCCAAAAGACGGAACGAATCCGGCAAGGCT
GATGAGATTCACTCTGCATTGGAGTCCGAGAGGCGTGTGAACGACCGGTTTGTGCCTGTG
CAGCGAATCAACATGAACCTGATCCAAAAGGTCAAACGAATCGCACCTCCGGACCAGTTC
AGATACTCGCTCCCTGCCATCAACACTGTTCGTCTTAAACAAAACAACCTCGATGACCAG
AGAATGGTGAGCGCCGTGGTCAGGACCACTGCCCAGCACTTTGTGGCTCGTGATTCCAGT
GCTGCTGCCCAGATTGTCCGTGTTGAAGATAAAATTACTGTTCGAGAAGTATCCAAGTCG
TTTGAGGAGGCGTCTCATACTGTGCCTGTCGCCCGGGAGCAGCTTCGAGGGTTCGGTTTC
GACGGATACATTTTGGACCTTGTTGAAGGTCCTGATCATAACCTGGCCCATCTTTGCGAG
ACAGCCAAAATCCACGCTGTTCCTTACAGTCGACAAGGACTTACTACCGAACAAATCTCA
AAGTTGCCTCCGTCCATCAACAGATTCATCTCCAAGAACATGCTGTACACCGTCAAGCAG
TCTCGTTACGGACAGCGGTACACCTCTACAAAGTCCGAGCCGATCGACACCTATCCTCCC
AAAAAGGATTCTCAAATCATCTACGAAAAGTTACCTGATCGGTCCCGAGAGCAGGAACTA
CAGGAGCAGTATGACGAACTTGTGCAGCGACTCAGACCCTTGAAGGAGGAAGTCAAGACT
GCAAACAGTTTGCTACAGGACAAGGCTCACTTAAAAAACGAGACTGCAGACGAGCTGCGT
CGATACAGGACCAGGGAGAGTAAGAAGGATATTCTGGCCAAGAACCTGCATACTGCAAAG
GTCAAGCTCAAGAAGCACGTCGAAAACGCTCCAGCGGGCATTGAGGAGGTCAAGGCTCTT
ATCGCAAAAAAACGAAACGAGACCCGCGACGAGATTGCTGCCAATATGCTTGATCGAGTC
AAGGTGATCAAAAAGCTGGGCCAGATCATTCCTGACGCTCAGAAGGACGCCATTGCGCTT
GCCAGAGCAAATGTACTGGTTTCTAGTCTCAAAACCCGATACGCCGAGGTGGAGGCCGAG
CGTGCCCAGTTCAAAGAAAAGTTCCAGCGTCTCAAGGAGCGATACAAAGCTGCCAAGGCA
GAATATGAAGCGTACATGGCGAACAAGGAGGAGGTGGAGCCCGAGTACGTGGTGTTTTTC
GAAGAGCTCAAGGCACAATACGATGGCCCCGATCTCCAGGCACATGTGGATGCACAGATT
GATGCTCTTCGCCAGGAGCTGACGTTTGCCAATGTCGATATGGATGCTCGAAACAAGTAC
GAAGAGGTGCTTCGACAGGCCGAGCGCACCAAGCAGGAGGTGGTCTATCTCACCAACAAA
CGAGACAATGCGGCCGAGGAGATGCAGAAGATCATCGACGTGTTTGTGCCCGAGCTTGAG
AGAATCGTCAATCTTGTTTCTTCGCGGTTTGCCGAGCTTCTCAAAAAGAAAGAAAAGGCT
TCTGGTTTGGTTGTTTTGAGAACAGTCAAGGAGAAGGCCAATCCCAACGATCCTAGTCCC
GAGGAGCCTCTCCCGTTTTCCCAATGGGGTATTGAGATCATGGTCAGTTTCCGAGAGGGA
GGCAACAAGTGTAAGCTGGATGGAACTACCCAGTCTGGAGGAGAGCGGTCCATTTCGATC
GGAACTTATCTTTTGGCGCTACAGGGGGTTGCTCCTGTGGCTTTCCGAGCTCTGGATGAG
ATCAACCAGGCGCTGGATGCCAAGAACGAAGTGATTATGAACCAGCATGTTGCCGACACG
GCTGCGGACTTTGACCAGCAGCTATTTTTGCTGTCGCCCAAGCTCATTCACTTCAATTAC
CCCAAGAAGATGCGAATTCTGACCATTTGCAACGGTTCGGGAGTTGCAACCAAGGGAGCG
TCTGGAGGTTCCTTCTTGGCTCTCAAGCATCTCCAGCAGGTGTTTTCCGAATAGACGTAA
GTATAGAGGGGAAAGTATAGAAGAGTAATGAATATTTATTGTTAACATCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E17193g_CDS-001

Protein length: 1118 aa.
Product: Conserved hypothetical protein

>YALI0E17193g_CDS-001 MAKRDLPNGSQTVAKRRRTQDEQMGVFDDDIDEEQRAYNNEIREHDQQHGSEMIPRPSLD
ICEKTGYRPGSILQIYMKNVMSYDECLVNFGPTLNFVIGPNGSGKSTMLAAICLAFAAPI
TCMGKAALKAQQLIKSTKDALEVRVVVKNFAGMPDLTFKRTLTRDEKQGKFFINGKSATM
KEVRATARELDIQIVSMTRFLPQDRVKDFTTMSPKELLITTMEDVGYKNMRSHYDSLVNQ
QEHSADDEHRLQLATDALADLDRRRNDLTDKIAQLEEREKQEEMVKKLEKVAVYSKGIFL
KQETERIKLEVAQLNAANKDLIEEKETLSEKMGSYQQVIKTCGNEMSQKEEKAKQYWRKY
RELRNKDKEIAGKMAKHEGDFEAAQRRLDKHEEETKVLQNKVQEDQASYTALCKELDDPA
FQERKEGLKAKLAELDKDYSEAKQVMRDLEAKRRNESGKADEIHSALESERRVNDRFVPV
QRINMNLIQKVKRIAPPDQFRYSLPAINTVRLKQNNLDDQRMVSAVVRTTAQHFVARDSS
AAAQIVRVEDKITVREVSKSFEEASHTVPVAREQLRGFGFDGYILDLVEGPDHNLAHLCE
TAKIHAVPYSRQGLTTEQISKLPPSINRFISKNMLYTVKQSRYGQRYTSTKSEPIDTYPP
KKDSQIIYEKLPDRSREQELQEQYDELVQRLRPLKEEVKTANSLLQDKAHLKNETADELR
RYRTRESKKDILAKNLHTAKVKLKKHVENAPAGIEEVKALIAKKRNETRDEIAANMLDRV
KVIKKLGQIIPDAQKDAIALARANVLVSSLKTRYAEVEAERAQFKEKFQRLKERYKAAKA
EYEAYMANKEEVEPEYVVFFEELKAQYDGPDLQAHVDAQIDALRQELTFANVDMDARNKY
EEVLRQAERTKQEVVYLTNKRDNAAEEMQKIIDVFVPELERIVNLVSSRFAELLKKKEKA
SGLVVLRTVKEKANPNDPSPEEPLPFSQWGIEIMVSFREGGNKCKLDGTTQSGGERSISI
GTYLLALQGVAPVAFRALDEINQALDAKNEVIMNQHVADTAADFDQQLFLLSPKLIHFNY
PKKMRILTICNGSGVATKGASGGSFLALKHLQQVFSE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG