YALI0E16775g

Overview

Description similar to uniprot|Q870N4 Neurospora crassa 49D12.190 Related to ABC transporter
Locus type CDS
Locus tag YALI0E16775g

Location

Species Yarrowia lipolytica Positions 1985080..1989923
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 4844 (nuc.)
Previous locus YALI0E16753g Next locus YALI0E16797g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16775g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16775gYALI0E16775g_mRNA-001YALI0E16775g_CDS-001

Nucleotide sequence

 

>YALI0E16775g
ATGTCGGAAAAAGATGCCGCGATTCTGGCGGTGCAATCCAGCCCGGAATCCAAGTCGTTC
AACGTCAGCGAGACGTCCGTGGAGGATGTGGATCTGCAAATGACTATGTTTGGCCAGACG
GTCGCCTTGGTGCGAAAACACATGCTGGTGTTCAAGAGATCGTGGTGGTGGACCTTCTTT
CGGTCGTCGCTGCTGCCTGTGGCGTTCATTGTTTTCATGGTGAGTATGGTCTCGGAGGGC
GAGTGCACGTCCAATTCATAGTGATGGCCACGACATTATCCATGGTGATGCCACATTCCT
TGTCTCTAACACAGTCATATTCGAAAGCGTTCTATTCGCCATACGCCAACTACGGTGTGT
CGGATCCCACTCCAGTTCGTCAACTGCGAGATGTGGTAAGCGAGCGAAAAATCATCTATT
ACTCACGTGATCCCTTGGGTGTCACCGATGAGATGCGTCGGATCATGAACACGGCTCTGG
AGGGGATCCCCAGCTCCCAGATCCTTGAGTTGGAACACGAAAACGACATGTTCCAGGTGT
GCAGTCAGAACCTGCGAGGTGATTCCGCCTGCTACGGAGGAGTCCAGTGGAACCATATCG
ATGAGGAGCAGAAGATTTATAACTACACCATCCGAGGAAACTCTGGATTGATTTTGACTG
ACATTGGAGGCCACAAGTCTGATCCAGATATCTTCATCCTTCCTCTGCAGTGGCAAATGG
ATAAGGCAATCACAGGAGAAACTACTGTCCCCTACACTCTCGCGTACACTGACGAGTCTC
AGACCCAACATGAACAAAATGTGATTTCCAAATTCCTTCAGATTGTGATTGATTGGTTAG
CTCCTGCCCTGTTTCTCGGCATGATTGGTGTCATTTACCATCTGGCCGGTATGGCAGCTC
AGGAACGAGAGTATGGTATTTCTGGTTTGCTTACAGCTATGGGGGTGAAGCAGTTCACCC
GTCATCTGGCCTATCTGATCTCGTTCAGCATTGTCTACCTTCCTGGATGGATCAGTATAG
CTCTTACTTTGAATCTTGTGCTGATGAAACCCACAAATGTGGCCATTTACATCTTTTACC
ACATTTTCTCGGGTATGTCAATGATCACCTGGGCTATGTTTCTCTCCATGTTCTTCTCTT
ACGCCCAGCTGGCCGGTATTGTAGCCTCTGGTCTGTCTTGTTTCTTGGCTATCATGAGTA
CCGTTCAGACTCGAGTCCCAAACAACGAAGGAAGGTTTAGAGACGCTGCTGTCTACGTTC
TGTCGTTTCTGTTTCCACCCATGAACTACCCTTACTTCATCCAAACTACAGGTCGATGGA
AGAAGGAAGACATCGGAACCAACATGGTGGAAAACGCGCCTGACTCCAACATCAAGGTGA
TTGTGATTTTCTTCGGCGCCATCTTCTCCATCTTCTTTTACCTGTTCCTTGCCATGATCG
TTGAGCGGTTCATGCATGGAGTTCATTCCAAGATCAACATTGACGAATCTCAAAAGGACA
GAGTTCTGCTTGAGGATGTGACCAAGACGTACAAAATCCGATCTCGATGGACTGGCCGGG
TCAAAAACACTGTTACAGCCGTGGACCATCTCAACCTGCCTGTTCATAACGGACAAATTG
TGTGCCTTCTAGGAGCAAACGGTTCCGGAAAGACCACCACTCTGGAGATGATCTCCAACA
TTCAAAAGCCTTCCAGCGGTACCATCACCTTTTCTCCAGGCTCCAGAGTTGGAATCTGCC
CCCAGAAGAACGTTATCTGGGACACTTTGACCTGTGAGGAGCATCTTCGGATTTGGACAC
AGCTCAAGGGTGTTCCCAAGAAGGAAATTCCTGCAGCTATCGAGTTCTTGATTGACAAGT
GTGATCTAAGCAGGAAGCGCCATGACCGAGCAGGAACCATGTCTGGAGGCCAGAAGCGTA
AGTTGCAGCTTGCCATTGCATTTGCTGGAGGAACCAACGTATGTGCTATCGATGAGGTGT
CTTCTGGACTTGATCCCCTTTCCCGACGAAAAATCTGGGAGATTATTACTTCAAGCAGAG
GTTCTCACACGATGCTTCTCACGACGCATTTCCTGGACGAGGCGGACATTCTCGGAGACA
ACATTGCCATCATGTCCAAGGGAACTCTGCAGGTGTACGGAACCACTGTTCAGCTCAAGG
AGCAGCTTGGAGGCGGCTATCGAATCTTCATCTCTCATCCAGGATCGGGTAGAGAGGAGA
TTGTTGAATTGGAAAGTGCTGCACAGGTTGCTGAACAAATTGAAGACCTGGAAGACAAGG
GTGTGGAGTACCGAGTAGCTGGACCCCAGCTTGAGGACGTCTTCCTCCGAGTGGCGGAAC
GAGACCACATTGAGCATGCCGAGATCACCGAAATGGGTGAGGGTGGTCTCAAGAAGGGCT
CTTCTACCGGCTTGTTGCATCAGACATGGTCCATGCTGGTCAAGCGGCTCATCATTCTCA
AGCGAAACCCCCTGGCTCATATTGTCATGTTCATTCTGCCCATCATTGTTGCTGGAGCCA
CCTCTCAGTTTTTGAGATCTTTCAAGGGATCGTCCTGCGAGGGAGACTCGCGATTCAGAC
GACAGGTCTACAACACCTACCGACTGGGTGTTGATCCACTAGACATGCCTGTTGGCCCCC
AGAGTGTCCTGATGGACTCTACTCAGGGAGTCAGAACGTTCATTGGAGGTATGCTCCGAG
GAATGGGCAACTCGACGATACAGAGCATGATCATGGCCAAAATGAACAACGGAACTCACT
ACACCGACACCCAGAGTTCTTTTGAGGCTTATCTGAACGCCAACTACACCCAGGTCTATC
CCGGAGGAGTGTACCTAGACTCTTCTGCCCCCATTGCTGCATATCTGACCAACACTGGCC
ATGGTACTTACTTTTCTGTTATGATGATGAATCTGTTGACAAATGTCCGCCAGAATGGTG
ACTACAAAATCTATGCTGACTTCTCCCCCTTCCAAATTCCCTGGTCTTCTTCCACCGGCG
ATACTCTCCAATTCATTGTCTACTTTGGTCTCACAATGAGTGTTGTGCCCGCTTTTGCAG
CCCTGTACCCTACTTTTGAGCGTCTTTCGCGTGTGCGTGCTATGCATTATTCCAATGGAC
TAAGGGTGGTTCCCCTTTGGACTGCCTATGCGATCTTTGACTGGGTTCCTCTCATGCTGA
CAGGTGCAGCTTGTACCGGAATCATCGGTGGCTCTTCGGAGTACGTTATGGGAGCAGGAT
ACTTGTTTGTTGTGTTCATGCTGTACGCATTGGCGGCTTCTCTATTTTCCTTTGTCGTGT
CTCTCATGGTCAAGTCTCAGCTGGCAGCTTTTGCCATCACTGCGGGCTATAATGCCATCT
ACTTCCTCATCTACATGATTGGATACATGTCCACACTCATGTATGAGGATCCCTGGAAGG
TGGACAGTACTGTCAGGGCCATCCATTTCACCATCTCCATCTTCTCGCCCACTTGCCAGC
TTGTGCGAGCGTTTTTCGTGGCCATGAATCTGTTTGGTGTTTTGTGTCGTTCAGACAACT
CCGAGATTTCTTACATGGGTGACATTCTCGCCTATGGAGGTCCTATTTTGTATCTCATTG
TGCAAGCCGCTGTGTTCTACGGTATTCTAGTCTGGTGGGACTCTGGACGTTTCCGGTTCG
TTTTCAGAGGCAAACACAGAGATCAGGATGAAGAAACCAAATCGCCGACTCCCTCTGACG
TCCAAAAGGAGGCCGAGCACGTGGATTCGAATCCCGAGTCATGGAACCAAGGTCTCAGGT
TGTCACACGTGTCTAAAAAGTACGGAGGCAACCGAGTCGTTGACGATGTCACTTATGGAG
TTCAGCCAAACGAGTGCTTTGCCCTTCTGGGTCCCAACGGAGCGGGTAAGACCACCACCT
TCAACATGATTCGAGGTGAGGAGAACCCGTCGTCTGGCGGCATCCACGTAACCGGTATTC
CTGTCTCTTCCAACCGAGCCCAGGCCCGTCAGCATCTCGGCGTCTGTCCCCAGTTTGACG
CTATGGACAAGCTGTCGGTGACTGAAACTCTGCAGTTTTACGCCATGTTGCGAGGGCTCA
GCAAGGAGGACCGTGACCACAATGTGGAGCATATTATTGGAGCCACCGGTCTGGATCGGT
TCCGAAAGACTACTGCCAACGCTCTTTCCGGAGGAAACAAGCGAAAGTTGTCCTTGGCAG
TCGCTCTCATGGCCGACCCTCAGGTGCTGCTGCTGGATGAGCCGTCTTCTGGAATGGATG
CCTTTGCCAAGCGAATCATGTGGCGTACTCTGTCATCTGTAGCCCATGGACGAAGTATTG
TGTTGACTACCCATTCAATGGAGGAGGCCGATGCGCTTGCCAACCGAGCAGGTATTCTTG
CCAAGAGGTTTTTGGCGATTGGGTCTGCGGCAGAGCTCCGTAATCAATACGGAAACCTGT
TCCACGTGCACTTGGTGTGTTCCAACGCGCCCTACACATCTGATGAGCAGATGTGGAATA
TTGCTGAGTGGACTAGAGAGGTGTTCCCTCAGTCCCAGATGGAGGAGAAGATGTACCACG
GGCAGATCAAGCTGGCTGTCCCATGCAAGACTGCCGGACACGAGAACAAAATGTCGACCA
TCTTCGCCATGTTGGAGAAGAACAAGGAGCGACTGGGCATTGAGTATTACTCGGTAAGTC
CTACGTCTCTTGAAGAGGTGTTCTTGGACATTGTGCGAAAGGACTTTGTTGGCGAGGATG
AATAATGAAGCAGCCCAAGAGAGCTGTCCCATAACATATTTATAGAGTGTCAAGAGACAC
GGTGTTAGATTGTTGATATTGAATTGATGTTAATGTGTACCCTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16775g_CDS-001

Protein length: 1550 aa.
Product: ABC transporterve, putative

>YALI0E16775g_CDS-001 MSEKDAAILAVQSSPESKSFNVSETSVEDVDLQMTMFGQTVALVRKHMLVFKRSWWWTFF
RSSLLPVAFIVFMSYSKAFYSPYANYGVSDPTPVRQLRDVVSERKIIYYSRDPLGVTDEM
RRIMNTALEGIPSSQILELEHENDMFQVCSQNLRGDSACYGGVQWNHIDEEQKIYNYTIR
GNSGLILTDIGGHKSDPDIFILPLQWQMDKAITGETTVPYTLAYTDESQTQHEQNVISKF
LQIVIDWLAPALFLGMIGVIYHLAGMAAQEREYGISGLLTAMGVKQFTRHLAYLISFSIV
YLPGWISIALTLNLVLMKPTNVAIYIFYHIFSGMSMITWAMFLSMFFSYAQLAGIVASGL
SCFLAIMSTVQTRVPNNEGRFRDAAVYVLSFLFPPMNYPYFIQTTGRWKKEDIGTNMVEN
APDSNIKVIVIFFGAIFSIFFYLFLAMIVERFMHGVHSKINIDESQKDRVLLEDVTKTYK
IRSRWTGRVKNTVTAVDHLNLPVHNGQIVCLLGANGSGKTTTLEMISNIQKPSSGTITFS
PGSRVGICPQKNVIWDTLTCEEHLRIWTQLKGVPKKEIPAAIEFLIDKCDLSRKRHDRAG
TMSGGQKRKLQLAIAFAGGTNVCAIDEVSSGLDPLSRRKIWEIITSSRGSHTMLLTTHFL
DEADILGDNIAIMSKGTLQVYGTTVQLKEQLGGGYRIFISHPGSGREEIVELESAAQVAE
QIEDLEDKGVEYRVAGPQLEDVFLRVAERDHIEHAEITEMGEGGLKKGSSTGLLHQTWSM
LVKRLIILKRNPLAHIVMFILPIIVAGATSQFLRSFKGSSCEGDSRFRRQVYNTYRLGVD
PLDMPVGPQSVLMDSTQGVRTFIGGMLRGMGNSTIQSMIMAKMNNGTHYTDTQSSFEAYL
NANYTQVYPGGVYLDSSAPIAAYLTNTGHGTYFSVMMMNLLTNVRQNGDYKIYADFSPFQ
IPWSSSTGDTLQFIVYFGLTMSVVPAFAALYPTFERLSRVRAMHYSNGLRVVPLWTAYAI
FDWVPLMLTGAACTGIIGGSSEYVMGAGYLFVVFMLYALAASLFSFVVSLMVKSQLAAFA
ITAGYNAIYFLIYMIGYMSTLMYEDPWKVDSTVRAIHFTISIFSPTCQLVRAFFVAMNLF
GVLCRSDNSEISYMGDILAYGGPILYLIVQAAVFYGILVWWDSGRFRFVFRGKHRDQDEE
TKSPTPSDVQKEAEHVDSNPESWNQGLRLSHVSKKYGGNRVVDDVTYGVQPNECFALLGP
NGAGKTTTFNMIRGEENPSSGGIHVTGIPVSSNRAQARQHLGVCPQFDAMDKLSVTETLQ
FYAMLRGLSKEDRDHNVEHIIGATGLDRFRKTTANALSGGNKRKLSLAVALMADPQVLLL
DEPSSGMDAFAKRIMWRTLSSVAHGRSIVLTTHSMEEADALANRAGILAKRFLAIGSAAE
LRNQYGNLFHVHLVCSNAPYTSDEQMWNIAEWTREVFPQSQMEEKMYHGQIKLAVPCKTA
GHENKMSTIFAMLEKNKERLGIEYYSVSPTSLEEVFLDIVRKDFVGEDE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG