YALI0E16456g

Overview

Description similar to uniprot|Q06213 Saccharomyces cerevisiae YPR168w NUT2 negative transcription regulator from artifical reporters
Locus type CDS
Locus tag YALI0E16456g

Location

Species Yarrowia lipolytica Positions 1953876..1954633
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 758 (nuc.)
Previous locus YALI0E16434g Next locus YALI0E16478g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16456g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16456gYALI0E16456g_mRNA-001YALI0E16456g_CDS-001

Nucleotide sequence

 

>YALI0E16456g
ATGGCAGAGGCGGCCCGACAAGAACTGGAGAACCAGCTGCGGCAGACGATCGAGACCCTC
GTGGAAATCTCGCTGCTGGTACACGACACCACCGGCTCTCAGGAGAACAAGGAGGGGCTC
ATTGAGCAGATGGACACTCTGGTCAAGGAGTTTCAGCGACTCAAGGAAATCAAGTGCGAC
AAACAGATCCCCATCGACGTGATCGACTACATTGACCAGGGCCGAAACCCGGACGTGTAC
ACCAGAGAGTTTGTCGAGCTGCTGCTGAAACAAAACCAGTTCATCCATGGAAAGATGGAC
ATCTACACAGTGAGTAAGGGAGTAAGGGAGAGCACGAGTGATGATATTCCACTTGATATT
TCATGTGGTGCACATTCTAACACAGAAATTTCAACAAACCCTGGCCAAAAACGTCAAGGA
AACGTATCCTGAAATGACAGAGGCGGTTGATGATGTTCTGCAACGGACCAGTCCTGCCTA
GATCTCACACAACTGGTGGTACGACACCGGGCTGTATTTAACGGTCTCGAGGGTCACCGC
TTGCAAGGTAACAACAGCCTGGATCGATTGAAAAGACAAAGACTAGATCCCGCTTATCTC
GTCGCAATCACCATATACAACGTGGTCACTGGTACACACATCAGGTAAAAGGAGTATCTC
ATGACCACACCCCAAAAGAAACATAGCACCCACTCGGCGGGGCTTCTTAAATTATTCATA
GCAATGTACTATTAATCGTTATACCAGGTAGGTTATCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16456g_CDS-001

Protein length: 135 aa.
Product: Subunit of the RNA polymerase II mediator complex, putative

>YALI0E16456g_CDS-001 MAEAARQELENQLRQTIETLVEISLLVHDTTGSQENKEGLIEQMDTLVKEFQRLKEIKCD
KQIPIDVIDYIDQGRNPDVYTREFVELLLKQNQFIHGKMDIYTKFQQTLAKNVKETYPEM
TEAVDDVLQRTSPA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG