YALI0E16412g

Overview

Description similar to uniprot|Q6CGP8 Yarrowia lipolytica YALI0A17446g, pseudogene
Locus type CDS
Locus tag YALI0E16412g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 1950234..1950839
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 606 (nuc.)
Previous locus YALI0E16390g Next locus YALI0E16434g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16412g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16412gYALI0E16412g_mRNA-001YALI0E16412g_CDS-001

Nucleotide sequence

 

>YALI0E16412g
ATGCAATCCAAGACAGGAGTGTGTATCAAGGGTAGGCCTTCCAAGTCTACCACGACTGAA
GATGCCACCCAGACCTCCTTCAAAGATTTCAACCCAAAGTTCCGGTGGAACGGAGAGAGT
GATGATGATGACCTCACCCAGATTGATGCCTTTCTCATGTCTCAAACCCTCTAACCCAAC
CTCCTGGTTCGGTTGCTGAGCCTGCATTTATGAGCCAGACATTGGTTGATACACCCAGTT
CGTCGCAGTCTTATCAGCCGGTGAAGCCAACCCCGTTGTCGCGGCCACACCGGCCAAAGA
TATTCTCTGAGACTTTTACTTTGAAACACACTGCTGACAGTATCTCTTATCTGGGGGCTT
CTCCAGTCTGCTCGCCCCACCCCCAACTTTCCGAAACGAGCCAAGTTGTGGAAGAAGCAC
TTTACCCCTGCAGATACGGACATTCGGAGCGGGAATGGGATGGTCAGCAGAGGAACCCAG
ACCGAGAACTCCAAATGGCTGACTGACACGCGAGCGATGGAGAACCACATTGTGGATGTG
GTCCAAAACCCTCTGTTCGACGCATATGTTGCCCGCATCAAGGAGTTAATGAAGGGCAAC
CAATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16412g_CDS-001

Protein length: 202 aa.
Product: Pseudogene, conserved in the Yarrowia clade

>YALI0E16412g_CDS-001 MQSKTGVCIKGRPSKSTTTEDATQTSFKDFNPKFRWNGESDDDDLTQIDAFLMSQTL*PN
LLVRLLSLHL*ARHWLIHPVRRSLISR*SQPRCRGHTGQRYSLRLLL*NTLLTVSLIWGL
LQSARPTPNFPKRAKLWKKHFTPADTDIRSGNGMVSRGTQTENSKWLTDTRAMENHIVDV
VQNPLFDAYVARIKELMKGNQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG