YALI0E16170g

Overview

Description similar to uniprot|O74161 Candida albicans CHS5 Chitin biosynthesis protein
Locus type CDS
Locus tag YALI0E16170g

Location

Species Yarrowia lipolytica Positions 1921357..1923206
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1850 (nuc.)
Previous locus YALI0E16159g Next locus YALI0E16192g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E16170g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E16170gYALI0E16170g_mRNA-001YALI0E16170g_CDS-001

Nucleotide sequence

 

>YALI0E16170g
ATGGTCGAAGTTTCGCTTACTGTCGGCAAATTGGACGCCTCTCTGGCGCTGCTGCTCACC
AAGGACCACCATCTCATCGAATTCCCCACAATTCTGCTTCCCGACGACGCCGAGGCCGGC
TCGGTGGTGAAGATCACCTGTGAGAAGGACTCTGGAGCGGAGAAGGAGGAAGAAGACAGC
TTTCAGAGCCTGCAAAAGGAGCTGCTGGAAACGTACGGCACGGAGCAGCCCAAGGCGCCA
GTTCTGAGCGCGAAAAACATCACCCAGACGTCTGTGGTGCTGGAATGGGAGCCTATTGAA
ATCGCCCAGGCCGATATCAAGAAACTGGTGCTGCTTCGAGATGGCGTTTGGTGCGGCCAC
ATTCCCAACCCACTGGTGCGAACCGCCACCAAGCTGTCTGGCTTTGGAGTCGAGAAGAAG
TACACCTTCCAGCTGGTTTTGTACACCACAGCAGGCACCTACGAGTCAAATCTGCTGGAA
ATTGAGACCCATAGCATGACCGACCTGCGAGGTATCACTGTGTGCTTGGGCGAAATCGAT
CCCAACATGACAACGGTCACCGAGTCTGAAATCTCCGAGTCTCTGGAGGACATTCACGCC
AAGCCTCTGCAAAATGAAGTCAAGCTCGATACCACCCATTTCGTGTGCACCAAGCCCCAG
GGAGCCCAATGGGAGAAGGCCGTCGACATGAACATTCCTGTTGTTTTGCCTGAGTGGCTC
CGAGCCTGCAAAATGGACAAGAAGATGGTCAACGTCAGAAACTTCTACCTGGACTCTGAT
CCCAAGCACAGATCCCAGTACAAACGAGCTCCTGGCGCCCCCGCCTCTCCTTCCATTCAC
CAGGCTGAGTCCATCAGGTCCACTGAGCCTGCTGCTTCTGCTCCTGAGTCTGCTCCTGTT
GAGTCTGCTCCAGTCGAATCTACTTCTGTCGAGTCTACTTCTGTCGAATCTACTCCTGCT
GCTGCTGCGCCTGTCGAGTCCACTGCTACCAATTCCTATCTTGAGAGATCCAACACTCGA
CATTCCATCTTCACCGAGGGCGCTACCGAGGCCGAGGAGGTGGACGAGGACCCTCTCAAC
GTTGAGCTCGAAAAGGAGGTTGCCGCCAACGACGCTGAAGTCGAGGCTGCCTCCGAGTCA
ATGGCCGAGGTCGATCTAGATGGTCCCAGTGGAGAGCCTGACCCAGACACCGTCGAGGAG
ATTGCCGTTACCGAGTCTGATCCTGTTGTCGTTGCCGAACCCGAACCTGAACCCGAAGTT
GAGGCCGAGACCAAGGCCGAGGACAAGGTCAAGGAGCCAGAAGAAGCAGTTACCACTGAT
GCCATTGAGCCCGAGACCAAGACTGTAATTGACCTCACTGGAGATGACAAGCCCACCGAG
CCTGAGACTGAGCCTGAGCCTGAGCCTGAATCTGAGAACCAGACTGAACCTGAATCCAAA
ACTACACCCGCCGAAGAGACTAAACCCGAGCCTGAAACCGTCAAGTCACCCTCTCAACTC
GCTGACGAATTTGCCGAAGTGTCTCTGGAAGACTCAAAGTCGCCTGAGGACAGCACTGCT
GAGGGAGGCAACAAGGAGGACGATGATGATGGAGATGAGGACGGGGACGAGGAAGAGGAA
GTGGACGATAAACAGGAGGACTCGAAGCCCGCAGCTGCATCTGGCAAGAAGAACAAGAAG
AAGAACAAGAAGAAGGGCAAGAAGTAGACTAACATGGTCTAATGAAGCGCATGGATGTTT
GACTAATGCACTAATGGTTAGTAAACAAGGATATTACCATGATATTACCATGATATTTTT
CCCGAATGATATACAACAACGATTTAAATTGATGAAGATGGCTTACAATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E16170g_CDS-001

Protein length: 569 aa.
Product: Chitin biosynthesis protein, putaive

>YALI0E16170g_CDS-001 MVEVSLTVGKLDASLALLLTKDHHLIEFPTILLPDDAEAGSVVKITCEKDSGAEKEEEDS
FQSLQKELLETYGTEQPKAPVLSAKNITQTSVVLEWEPIEIAQADIKKLVLLRDGVWCGH
IPNPLVRTATKLSGFGVEKKYTFQLVLYTTAGTYESNLLEIETHSMTDLRGITVCLGEID
PNMTTVTESEISESLEDIHAKPLQNEVKLDTTHFVCTKPQGAQWEKAVDMNIPVVLPEWL
RACKMDKKMVNVRNFYLDSDPKHRSQYKRAPGAPASPSIHQAESIRSTEPAASAPESAPV
ESAPVESTSVESTSVESTPAAAAPVESTATNSYLERSNTRHSIFTEGATEAEEVDEDPLN
VELEKEVAANDAEVEAASESMAEVDLDGPSGEPDPDTVEEIAVTESDPVVVAEPEPEPEV
EAETKAEDKVKEPEEAVTTDAIEPETKTVIDLTGDDKPTEPETEPEPEPESENQTEPESK
TTPAEETKPEPETVKSPSQLADEFAEVSLEDSKSPEDSTAEGGNKEDDDDGDEDGDEEEE
VDDKQEDSKPAAASGKKNKKKNKKKGKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG