YALI0E15796g

Overview

Description similar to uniprot|P38865 Saccharomyces cerevisiae CTR2 YHR175W Putative low-affinity copper transporter of the vacuolar membrane; similar to uniprot|P38865 Saccharomyces cerevisiae CTR2 YHR175W Putative low-affinity copper transporter of the vacuolar membrane
Locus type CDS
Locus tag YALI0E15796g

Location

Species Yarrowia lipolytica Positions 1886558..1887357
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 800 (nuc.)
Previous locus YALI0E15763t Next locus YALI0E15818g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E15796g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E15796gYALI0E15796g_mRNA-001YALI0E15796g_CDS-002YALI0E15796g_mRNA-002YALI0E15796g_CDS-001

Nucleotide sequence

 

>YALI0E15796g
ATGGACCACTCTCACCACATGATGGACCACAGTGGCCACGACATGCCCATGCCCGATATG
CCCGGCCACGGCGACATGCCCGAAATGTGCAGCATGAACATGATCTTCAACTGGGACACA
AAGGGCATGTGCGTGGTGTTCCCCTGGTGGCACGTCAAGACCCATGTGGGCATGATTCTG
ACCGTCATCGCCGTGGTCTTCATCTCCGCAGGATACGAATACGTGCGAAAGCTGTCGCGG
GACATTGATGCCGCCTTCAAGGGCTCCGGTGAGTACTCCTTTTGATGATTTCCTTTTGAT
GATTTCCTTTGATGATTTCCTTGGATGGTTTTCTTTTTCTTCTTTTCGTCATGTTCCTTT
GGACAATACTTATACAGACTGTGATCTGGAACCGATTATTAATCCAGACGTTCGACCTTC
GGACCAGAAAAAGATCCGAATCTACAAGTCCATCTTCTATGGATTCCAAGTGGGCTACAG
CTTCTTACTGATGTGAGTATGACATGATGCGGATGTGGTGTGGGAGTGAGGAGGGAGTGA
AGATATGTGTGTGTTGGATGTGATATGATGTGATGTTGTGTTATACACTAAGTGTGGACT
AACACAGGCTGGTCTTCATGACTTACAATGCCTGGCTCATGGCTGCTGTGGCCATTGGAG
CTGGTGTTGGCTACTTCATCTGGGGCGGTAAGTCCAGTGAGCGATCCATGTCTTGCCATT
AAGAGAGAGGCACATGTGACAGAAATTTAATAACTATAATAACGAATATAACGAATTGAT
TACGTGTCTATGGTGTGTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E15796g_CDS-002

Protein length: 156 aa.
Product: Low-affinity copper transporter of the vacuolar membrane, putative

>YALI0E15796g_CDS-002 MDHSHHMMDHSGHDMPMPDMPGHGDMPEMCSMNMIFNWDTKGMCVVFPWWHVKTHVGMIL
TVIAVVFISAGYEYVRKLSRDIDAAFKGSDVRPSDQKKIRIYKSIFYGFQVGYSFLLMLV
FMTYNAWLMAAVAIGAGVGYFIWGGKSSERSMSCH*

YALI0E15796g_CDS-001

Protein length: 166 aa.
Product: Low-affinity copper transporter of the vacuolar membrane, putative

>YALI0E15796g_CDS-001 MDHSHHMMDHSGHDMPMPDMPGHGDMPEMCSMNMIFNWDTKGMCVVFPWWHVKTHVGMIL
TVIAVVFISAGYEYVRKLSRDIDAAFKGSDCDLEPIINPDVRPSDQKKIRIYKSIFYGFQ
VGYSFLLMLVFMTYNAWLMAAVAIGAGVGYFIWGGKSSERSMSCH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG