YALI0E15708g - MLS1

Overview

Description uniprot|Q6C5R9 Yarrowia lipolytica YALI0E15708g MLS1 Malate synthase, putative
Locus type CDS
Gene name MLS1
Locus tag YALI0E15708g

Location

Species Yarrowia lipolytica Positions 1880043..1882084
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2042 (nuc.)
Previous locus YALI0E15686g Next locus YALI0E15730g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E15708g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E15708gYALI0E15708g_mRNA-001YALI0E15708g_CDS-001

Nucleotide sequence

 

>YALI0E15708g
AGTGAGTATTATTGTGGGGTAAACCAGGTGGCAGGTGGCAGGTGGCAGGTGGCAGGTGTG
GCAGGTGGTGGCACGATGGGGGCTGGTGGTGGTACGAAGGTGGCAGCAAAGTCACACCGA
GCCCTCACGCCTCCTCAAACCAACCACCCATGTGACTCAACAGCCTCTGACATGGCCCAC
ACACCAGCCAGCGCTACTCAGAACCGCGAGCGGGATCCAACGTCCACTCCTCTCTTCGAC
AATGGGGCCTGGTCTGCCGGATAGCGCTTCCGTTGTACCTGCACAAGAGATGCAAAAAAA
CTGCACACTCCATACTAACCATTTAGTGACTACTGTTCCTTCTAGCAACACTGACGCCAT
TCTCAAGGGTGTTGAGATCCGGGCTAACATCCCCGCCAACGCCCAGCACATCTTCTCCAA
GGAGGCTCTGGCTTTCATCGCCACCCTGCACCGAACCTTCGATGCCCGACGACACGAGCT
CCTTGCTGCTCGAGTCGCTCGACAGGCCCGAATCGATGCCGGCGAGTTCCCCGACTTCCT
CCCCGAGACCAAGAACATCCGAGATGACCCCACTTGGCAGGGTGCCCCCCCCGCCCCCGG
TCTGGTTGATCGACGAGTCGAGATCACCGGCCCCACTGACCGAAAGATGGTCATCAACGC
CCTGAACTCCGACGTCTGGACCTACATGGCTGACTTTGAGGACTCCTCTGCCCCCACCTG
GTCCAACATGGTCGATGGTCAGGTCAACCTCTACGACGGTGTCCGACGAACCATCACCTT
CCAGGCCCCCGGTGGAAAGTCTTACAAGCTCCGATCCGACAAGGAGAAGCTCCCCACCCT
TATCGTCCGACCTCGAGGCTGGCACCTTGATGAGACCCACTTCCTTGTTGATGGCAAGCC
CATCTCCGGTGGTCTCTTTGATTTCGGTCTGTACTTCTTCAACAACGCCAAGGAGTCCGT
TGCTCGAGGCGCTGGCCCTTACTTCTACCTCCCCAAGATGGAGTCCCACCTTGAGGCCCG
ACTCTGGAACGACGTCTTCAAGCTCTCTCAGGACTGGATCGGCATGCCCCGAGGAACCAT
CCGAGGTACCGTTCTGATCGAGACCATTCTCGCCGCCTTTGAGATGGACGAGATCATCTA
CGAGCTCCGAGAGCACTCCTCTGGTCTCAACTGTGGCCGATGGGATTACATCTTCTCCTT
CATCAAGAAGTTCAAGAACCATCCCGAGTTTGTTCTCCCCGACCGAGGTGACGTTACCAT
GACCGTCCCTTACATGTCTGCTTACGTCAAGCTCCTCATCCAGACCTGCCACAAGCGAGG
CGTCCACGCCATGGGCGGTATGGCTGCTCAGATCCCCATCAAGAACGATGCTGCTGCCAA
CAAGGTTGCCATGGAGGGTGTCTACAAGGACAAGCTCCGAGAGGTGACCGCCGGCCACGA
CGGTACCTGGGTTGCTCACCCCCAGCTTGCCATCATCGCCTCCGAGGTTTTCAACAAGCA
CATGCCCACTCCTAACCAGATCTACCGACGACGAGAGGATGTCCACATCACCGCTCGAGA
CCTCATCAACCCTTACATTGAGGGCGGCAAGATCACCGAGGAGGGTATCCGAAAGAACCT
GTTCATCGGTCTTGGCTACATGGAGGCCTGGCTCCGTGGTCTTGGTTGTGTCCCCATCAA
CTACTTGATGGAGGATGCTGCCACCGCTGAGGTGTCTCGATCTCAGCTCCACCAGTGGGT
CAAGCACGGTGTTACCACCGCCGAAGGCAAGAAGGTCACCAAGGACTACGCCGTCAAGCT
TCTCAACGAGGAGACCGACAAGCTCATCAAGAACTCCAAGCCCGGCAACAAGTTTGCTGA
GGCCGCCGCTTACTTCAAGCCCGAGATTGTTGGCGACAAGTACTCCGACTTCCTCACCAC
TCTCCTTTACGACCAGATCACCTCCGTTGGCAGCTCTTCCAAGCTCTAAGCGCGATGTGT
TAAATTGTGAATATTTATCAATCAAATTGTTTATGAATTAAATGAACATATATATACATG
TA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E15708g_CDS-001

Protein length: 548 aa.
Product: Malate synthase, putative
Gene: MLS1

>YALI0E15708g_CDS-001 MTTVPSSNTDAILKGVEIRANIPANAQHIFSKEALAFIATLHRTFDARRHELLAARVARQ
ARIDAGEFPDFLPETKNIRDDPTWQGAPPAPGLVDRRVEITGPTDRKMVINALNSDVWTY
MADFEDSSAPTWSNMVDGQVNLYDGVRRTITFQAPGGKSYKLRSDKEKLPTLIVRPRGWH
LDETHFLVDGKPISGGLFDFGLYFFNNAKESVARGAGPYFYLPKMESHLEARLWNDVFKL
SQDWIGMPRGTIRGTVLIETILAAFEMDEIIYELREHSSGLNCGRWDYIFSFIKKFKNHP
EFVLPDRGDVTMTVPYMSAYVKLLIQTCHKRGVHAMGGMAAQIPIKNDAAANKVAMEGVY
KDKLREVTAGHDGTWVAHPQLAIIASEVFNKHMPTPNQIYRRREDVHITARDLINPYIEG
GKITEEGIRKNLFIGLGYMEAWLRGLGCVPINYLMEDAATAEVSRSQLHQWVKHGVTTAE
GKKVTKDYAVKLLNEETDKLIKNSKPGNKFAEAAAYFKPEIVGDKYSDFLTTLLYDQITS
VGSSSKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG