YALI0E15532g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E15532g

Location

Species Yarrowia lipolytica Positions 1857691..1858878
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1188 (nuc.)
Previous locus YALI0E15510g Next locus YALI0E15554g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E15532g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E15532gYALI0E15532g_mRNA-001YALI0E15532g_CDS-001

Nucleotide sequence

 

>YALI0E15532g
ATGCATGACAAGAGCACACTTTTTTGGCCACCTGAGCACTCCAATATCATGAGACAGCTG
ATCCGGGGGTTTGCAACCGCCACGTCAACGCAGACAGTGAAAGCTCCAACAGGAAAGCCT
CGGCGAGTAGGTAGATCTCTTTTCAGCAAGAAAAATGCCACGGGCCGGGGGTCTACAGCA
CATGCCAACAGCCACCATGAGATTATCGATGAGCCCCTAAGTCACCCAAGAATCGACAAA
GAAATCAGATCGTGTGGATCGGTCCAGGCTGACGCATTCTTCGCCAATGTCGCGGGCCAT
AACCTCACCGCAGAAGACATGTGGAGCCCGAAGAAGTACACAAAGTGGATAATGCCCCCA
GACAACAGTGGAAACCAGGACCCGGGGACATATTGGCCGGACGTGGTCACAGATCCCACT
CAGCTCAAAGGAATTCATCAGCATACGGTTGGAAACGGCATCAAGAAAGCCAGTTACTCC
CATAGCATAGTCGATTTTACATCGTTCTACTTGTCGCCATGGACGGTACAGGGTGTGTTC
AGAAAGACGAGACCGTCAATTGTCATACAGTGGCATTCGTTCCTACCCCTAAATGGTCAC
AAGGTCAACGAATTCAACAACATGGGGTATGCGGCTCCAGGAATGCCAACATCTACAGGG
ATGCCCTTGAAAGATCAGAGAAACCCCTGTCCATTAACGTCAGGTGTCTACCGAAGCATC
ACGGCCAAGATATACAGAAGAATTTTCTTGGAAGAGTTCCACAAAACCCCAGGTGCGTGC
GATGGAGTCTACGTATTCCGTGTTCGCAAGGTACCTGAATCCGAGTCGTACATTAGAAGC
GGCATGGCAGAAATGATCAAATACGTCGCTGGCGATTGGAGGAACAAAAAGAGTCTTTTC
AAACCAGATCCCATGGATACAATCAATAAGGCGCTCCAATCCTACAGAATTATCGAACCG
CTCACCCCGGAGTTGGCCGAAGTCCGTCGGTTTGACCCAACACTCATGAAGCCAAACAAC
GACGGGAAACAGAAAACGGAAGAGAAGCTGTCGCCAAAACGCATCAACTCGAACGACAAG
GCGAGAAAGCTCGCTCGGGGAGGCCCTTCCATGCCGGTCAGACAAGATTAAATGACAACT
CAATGTATATACACAGTCATCTAAAAAATAGTTTGATATCTATATTTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E15532g_CDS-001

Protein length: 377 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E15532g_CDS-001 MHDKSTLFWPPEHSNIMRQLIRGFATATSTQTVKAPTGKPRRVGRSLFSKKNATGRGSTA
HANSHHEIIDEPLSHPRIDKEIRSCGSVQADAFFANVAGHNLTAEDMWSPKKYTKWIMPP
DNSGNQDPGTYWPDVVTDPTQLKGIHQHTVGNGIKKASYSHSIVDFTSFYLSPWTVQGVF
RKTRPSIVIQWHSFLPLNGHKVNEFNNMGYAAPGMPTSTGMPLKDQRNPCPLTSGVYRSI
TAKIYRRIFLEEFHKTPGACDGVYVFRVRKVPESESYIRSGMAEMIKYVAGDWRNKKSLF
KPDPMDTINKALQSYRIIEPLTPELAEVRRFDPTLMKPNNDGKQKTEEKLSPKRINSNDK
ARKLARGGPSMPVRQD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG