YALI0E15147g

Overview

Description weakly similar to uniprot|C4R270 Komagataella pastoris hypothetical protein
Locus type CDS
Locus tag YALI0E15147g

Location

Species Yarrowia lipolytica Positions 1809097..1811389
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2293 (nuc.)
Previous locus YALI0E15136g Next locus YALI0E15180g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E15147g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E15147gYALI0E15147g_mRNA-001YALI0E15147g_CDS-001

Nucleotide sequence

 

>YALI0E15147g
ATGGTGGCGATACAAGCAACAGAGAAGTACAGCAGCATGAGCTGTATGGACTGCCCTGCC
TTCGGTTACTCCCACTGTCCTGTTGAGCCCCAGGATATCGAAGATTTGTGCTGCAAGCGA
GATCACGCAATTAACTTCGGCAAGCACTACACAGCGCGTAAAGTGGTTCCCCACAAACCC
CTAAGCATCACACACGGAATAATCACTCCACCCGAGGAAGCCGACAACGAGCCAGAGTAC
TTCAAAAGACACGTTTTCATGTCCTCTACCCTCGACTCCCTACCATTTGAAATTAGAGAA
CAGATTGCATGGGACTGTTCACAACGAGATGCTGTGAGGCTGTGCTCCACTAGCACCAGC
CTGATGCACTCAACCCTCCCACGACTATACAGTCATATCGTTTTTGATAACTCTCCCATC
CACTACTGTGAGGAACTCTCCGCAGAGGGCAACGGTCTGCTAAGCAAGGTCACCACAATC
GGAGGCATGCGGGAGTGCCTGCGAAGCCTCAAGGACCCCGACAAAGCCCATATGGTGAAA
AAGCTAGAAATCCGGCGTGTGGACATACCCGATTACGACATCATATCTGCGGCAAGGGTC
TTCCTTCCGTTGATGACTCGACTGGAGAGGCTTGTTTGGACATTCACTTCAAGTAGCAAC
AAAGTGCTCCATCTACTGAGTAACAAGGCGGCCTTGAAGCACCTGCAGGTTTCCACGGTG
GACAGGCTGAGTCCAGACTTCACGAACCTGCAGATTCTTGAAACCTGCGAAATCGACAAA
ATTCCTTCAGCCGACCGGCTGAGCTCTCTCACCCTGCACATGTGCAAGGGCCTGACTCCA
CTTGATGGGCTGACCATGAAGAACATTCGAAAGCTCAACATCTCTCGAATTCCTGGACGT
GCTGATGGGTTCGTGGCCGTGGAGGCCATCATGCTTTCGCGTGCTATTGACACGTCGCAA
CTAACACACCTATCACTGACCCTTCATGATGATGGCTTCCTCAAGCAGTTATCCAGATCG
TCTTTTGACAACCTCGACTACCTGAGGCTGGATGTGACAGAAGACACTGATACTGTCAGC
AATGCATTTCGCATTCAAGAAGAGTCTGGCGGAACGCGCAATGATGGCTGCATTTCTGGC
GTGGCTACATTTCTAGCTCATGTCAACGCTCTCTCTCTCGATTTGATAATCCACTGGAAC
TCTTCGGTGACTCATCATAGGCAATTCTGGCCCATGTACTGCGGTGAGATGGCTGGCGCT
CTGAGCAACTCGCAGCTTCGGCATTTACACCTTGAGTGCAAGGAGGATGACAGAGGCACA
CTTATGATCCCATACGTGTGCCTCAGTTACATCGTTGCCAACCTCTCACCTCACTTGGAA
GGTCTTGGTATTTCATATCCCCTCCTCGACACTGACCACAGTTACAATCGATCCTACTCG
AACTATGGAAATGGCGAAACGTTACAGGATCTCTTAAAGTACCTTAATGTCAAGTATCTT
GATCTCCTAAACTGTGGACCCCCTCCGCGAGCATGTTCCCTAGTTGGTGGGGGAGCTGTT
GCCATACCTGGATTCGAAGATGGCCACCACCCTGATGATTACAGCCGCGTCATCCGAGAG
ATACTACCCGCCATCCCATCCACTCGCTACGTGGGTATTGGATCGCATGTTTTTGACGTA
AGAGATCCTTCCCGGTTACCTATTGTTAGAGACGGACTTCGAGAGTGGTTTATCGACAAA
CTCCTGGGGCTTGAGAATACCTCATAGTAATTCTCACGACCATCACGAATCATGATGACT
TTTACGACTTTCACGACTTTCACGACTTTCACGACTTTCACGACTTTCACGACTTTCACG
ACTTTCACGACTTTCACGACCTTTACGACCTTTACGACCTTTACGACTTACGACTTTTCC
GACCTTATGACGCTTATGACCTTTATGACCTTTACGACGCTTATGACCTCTATGACCCTT
ACGACGCTTATGACCTCTATGACCCTTACGACCTTTATGACATCTATAACCTTTATGACC
TTTATGACCTTTATGACCTTTATGACCTTTATGACCTTTATGACCCTTCTGATGACTTTA
TGACTTTATGACCCGCTTTATCCATGATCCCCACGATCATCACGACCTTGCTATTACGAC
ACTGTTTATAAAGTCCTATGACCCTTATGATATTAATGACTCTAATGACTCTAATGACTC
TACGATTTTCGTGACCTCACAGCACACACAACATCCCTTCAATACATATTTAAAAAAATA
ATCTTGATATCTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E15147g_CDS-001

Protein length: 589 aa.
Product: Conserved hypothetical protein

>YALI0E15147g_CDS-001 MVAIQATEKYSSMSCMDCPAFGYSHCPVEPQDIEDLCCKRDHAINFGKHYTARKVVPHKP
LSITHGIITPPEEADNEPEYFKRHVFMSSTLDSLPFEIREQIAWDCSQRDAVRLCSTSTS
LMHSTLPRLYSHIVFDNSPIHYCEELSAEGNGLLSKVTTIGGMRECLRSLKDPDKAHMVK
KLEIRRVDIPDYDIISAARVFLPLMTRLERLVWTFTSSSNKVLHLLSNKAALKHLQVSTV
DRLSPDFTNLQILETCEIDKIPSADRLSSLTLHMCKGLTPLDGLTMKNIRKLNISRIPGR
ADGFVAVEAIMLSRAIDTSQLTHLSLTLHDDGFLKQLSRSSFDNLDYLRLDVTEDTDTVS
NAFRIQEESGGTRNDGCISGVATFLAHVNALSLDLIIHWNSSVTHHRQFWPMYCGEMAGA
LSNSQLRHLHLECKEDDRGTLMIPYVCLSYIVANLSPHLEGLGISYPLLDTDHSYNRSYS
NYGNGETLQDLLKYLNVKYLDLLNCGPPPRACSLVGGGAVAIPGFEDGHHPDDYSRVIRE
ILPAIPSTRYVGIGSHVFDVRDPSRLPIVRDGLREWFIDKLLGLENTS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG