YALI0E15037g

Overview

Description weakly similar to uniprot|P47822 Saccharomyces cerevisiae YDR308c SRB7 DNA-directed RNA polymerase II holoenzyme and kornberg's mediator (SRB) subcomplex subunit
Locus type CDS
Locus tag YALI0E15037g

Location

Species Yarrowia lipolytica Positions 1796118..1796812
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 695 (nuc.)
Previous locus YALI0E15004g Next locus YALI0E15059g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E15037g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E15037gYALI0E15037g_mRNA-001YALI0E15037g_CDS-001

Nucleotide sequence

 

>YALI0E15037g
ATGGCGGACCGACTGACCCAGCTACAGACGTGCGTGGATCAAATGCTGACCCAGTATTTC
TCGGCACTAACGCACATTAACACCAATCATGGGTTCAAGTCGTTAGCGGGGGAGGAGTTG
GTCAAGGACGATACGGTGCCTGTTGTCACAGACGAAGAACGCGAGAGAACGCTAGAGGAG
CTGGCGAAAGACCTTGTGGTCAAGTCACAACAGATTGATTACCTCATAGATTCGTTGCCA
GGTATCGGTTCTTCGGAGGAACATCAGATGCAGCAGATCGAAAAGCTGCAAAAGGAGCTG
GAGCATTATGATCAGGTAACAGAAGACGTCATCAAGGAGAAGGACGAGTTGTTGGAGCAC
TGTGATGAACTGATTCTAAAGCTCGCACAGAGAAAGGCCCACATCGACGTGGAGAGCATG
TAAGGATGGGCAAACACCCGATAAGCCTGCCCTGCGAAACGGGCAGCAGAAAAAGAGGCA
CGACGGGTAAGACTAGGCCTGCTCACATCCTACCGCGAGGCGTTCTTATCACTGGTAATA
CCAGAAGCCTCTAGCATCTTGTGGAGCTGGAGCACTCTGTTCTAATGGCCACATCTTTAT
AGAGTGCATCAATTTTTGTATTGTATGTATTATAAATAATCAAGAGGCTGCGACAGCGGC
AACCTCAGTTTTTGTGGCGGTGGCGGTAGTCACGT

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0E15037g_CDS-001

Protein length: 141 aa.
Product: Conserved hypothetical protein

>YALI0E15037g_CDS-001 MADRLTQLQTCVDQMLTQYFSALTHINTNHGFKSLAGEELVKDDTVPVVTDEERERTLEE
LAKDLVVKSQQIDYLIDSLPGIGSSEEHQMQQIEKLQKELEHYDQVTEDVIKEKDELLEH
CDELILKLAQRKAHIDVESM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG