YALI0E14927g

Overview

Description weakly similar to uniprot|P34223 Saccharomyces cerevisiae YBL058w SHP1 potential regulatory subunit for GLC7P
Locus type CDS
Locus tag YALI0E14927g

Location

Species Yarrowia lipolytica Positions 1778470..1779880
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1411 (nuc.)
Previous locus YALI0E14883r Next locus YALI0E14949g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E14927g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E14927gYALI0E14927g_mRNA-001YALI0E14927g_CDS-001

Nucleotide sequence

 

>YALI0E14927g
ATGGTATCTGAAGAAGAAAAAACCGAACGAATCGCGCAATTCGTGGGAATCACACAGTCC
TCGCCCGAAGATGCACAGGATTGCTTGCTCCACACCGACTGGGACGTGGCTCAGGCTGTC
GATCTGTTCTTGTCGGCTAACGACGACCCCGAGGAGAACGAGGAGGATGCTGAAAACGAC
GATGCCGAGGACATTGACGTCGAGGAGGACTCGGACGCATACGCCAACCCCTCGGGTCTG
GCCCCCAGTGGAATTGCCGCCGGAATCCAGGGCTTCCTCAGTGGCCTAGCTGGCAGAGAT
GATCCTGCTGCTGCTGCCTCTGAGCCACAGGGAATCCTCAGCAACCCCCAGCCCTCTGGA
TACAGACTCGGAGACGGTACCGGGTCGTCAACTCCTGTCAGCGGAGCCAGCAGTAGCACC
ACTCCTGCTCCTTCTGCCCCTGCCCCTGCTCCTGCTCCTAGAAGGGGCGTGGCGGGTGTC
AGAACTCTGGGAGATCTGTCGCGAGACAATGCGCCTCCCAAGCGACAGGACCTATTCACT
GGAGGAGAAAAGTCGGCTCTGGCTGTCCAGAACCCCAACAGACCTGGCCAGCCGGGCAAC
CAGGGAGGCAACCCTCTGGTTAATGATATCATTCGACGAGCTGAGGCCAACCCAGCAAGA
CCTCGAGGTGAGAACGACGATGAGTCAGAGGATGAGGAACAGGTGGGAAGCTTCCACGGA
ACAGGGTTCACTCTGGGCTCCGACGAGGTCCAAAGCCGACCCGTGGAGTCTGCTCTCCCC
ACCTCTCTCCCCAAGGTCTCTCGATCAATCACCTTCTGGCAGAACGGTTTCACAGTCGAG
GATGGTCCTCTGTACAGATACGACGACCCCCGAAACCAGCGGTACCTTGAGACCCTCAAC
CAAGGACGAGCTCCTCTGGCTCTCCTGGATGTCCAACATAACCAGGCCGTTGATATTAAC
GTGACGGACCGAAGTGAAGAGGCATACGTGGAGAAGAAGCCTGTCTACGGAGGTTCTGGT
AATCGTCTCGGATCTCCTGTTCCTGGGGAGCCTACCCCCTCCTCCTCCGCCACTCCGCCA
CCCTCCGCCCCTACTCCTGCTGCTACCTCATCTGGTCCTTCAAACTCCTCATCTGGAGCA
GGAGGAAGCCGAATTCAGATTCGACTTGGCGACGGAACTCGTCTTACTCCCTCCTTCTCC
CCCGATCTCACTGTCCAGTCCCTCTACGATTTTGTTGATGAACACAACCCCTCTGGTCGA
GAATACGTTCTCCAGACCACATTCCCCAATAAGGAACTTAGAGACAAGAGCTTGACTCTG
AAGGATGCTAAGGTTATTGGTGCTGCTATTGTTCAGCGATACGAGTAGTCACAATACAGA
GTAACGATAATGACATGAACAATGTACAAGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E14927g_CDS-001

Protein length: 456 aa.
Product: Conserved hypothetical protein

>YALI0E14927g_CDS-001 MVSEEEKTERIAQFVGITQSSPEDAQDCLLHTDWDVAQAVDLFLSANDDPEENEEDAEND
DAEDIDVEEDSDAYANPSGLAPSGIAAGIQGFLSGLAGRDDPAAAASEPQGILSNPQPSG
YRLGDGTGSSTPVSGASSSTTPAPSAPAPAPAPRRGVAGVRTLGDLSRDNAPPKRQDLFT
GGEKSALAVQNPNRPGQPGNQGGNPLVNDIIRRAEANPARPRGENDDESEDEEQVGSFHG
TGFTLGSDEVQSRPVESALPTSLPKVSRSITFWQNGFTVEDGPLYRYDDPRNQRYLETLN
QGRAPLALLDVQHNQAVDINVTDRSEEAYVEKKPVYGGSGNRLGSPVPGEPTPSSSATPP
PSAPTPAATSSGPSNSSSGAGGSRIQIRLGDGTRLTPSFSPDLTVQSLYDFVDEHNPSGR
EYVLQTTFPNKELRDKSLTLKDAKVIGAAIVQRYE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG